Query= MSMg01no365_o02.b1 MSMg01no365_o02.b1 CHROMAT_FILE:
MSMg01no365_o02.b1 PHD_FILE: MSMg01no365_o02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:30 2005
(437 letters)
>mm_chr5_130265764_130266600
Length = 837
Score = 766 bits (396), Expect = 0.0
Identities = 425/436 (97%), Gaps = 4/436 (0%)
Strand = Plus / Plus
Query: 4 gcggaattccagagatttcc--ggggatgcttgcctttgcctgcacagtcctcagaatca 61
||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 204 gcggaattccagagatt--cagggggatgcttgcctttgcctgcacagtcctcagaatcg 261
Query: 62 taatggttggattcatttggacgagtgagtgacccgtccacaggtcacctgagttctgct 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 taatggttggattcatttggacgagtgagtgacccgtccacaggtcacctgagttctgct 321
Query: 122 cacagcctccgaagtgttttcacacttcttgtgtaattcctacagccctgacgtcagcag 181
||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 322 cacagcctctgaagtgttttcacacttcttgtgtaattcctacagccctgacatcagcag 381
Query: 182 tccaagaattgctgtcttcaacagagagatatgctcactatttactgactgccacaggtc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tccaagaattgctgtcttcaacagagagatatgctcactatttactgactgccacaggtc 441
Query: 242 acatccggagccaaagtgatttccaaggcattcgtttcattccctaatgcattactcgag 301
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 acatccggagccaaagcgatttccaaggcattcgtttcattccctaatgcattactcgag 501
Query: 302 ttaacaatttacctaaaccagggttatccatcctagcctaatacttattaacgctgactg 361
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 502 ttaacaatttacctaaaccagggttgtccatcctagcctaatacttattaacgctgactg 561
Query: 362 tggcattaacgcattaatacagcagaggacatcttactccctagggttcttataaaaacc 421
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 cggcattaatgcattaatacagcagaggacatcttactccctagggttcttataaaaacc 621
Query: 422 tgtgctaggattacag 437
||||||||||||||||
Sbjct: 622 tgtgctaggattacag 637
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space: 354384
Effective search space used: 354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no365_o02.g1 MSMg01no365_o02.g1 CHROMAT_FILE:
MSMg01no365_o02.g1 PHD_FILE: MSMg01no365_o02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:30 2005
(397 letters)
>mm_chr5_130418941_130419737
Length = 797
Score = 745 bits (385), Expect = 0.0
Identities = 394/397 (99%)
Strand = Plus / Minus
Query: 1 cacttataagcacgagctagcctagcctagctggtctatgaaaagggctaagtgggaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 cacttataagcacgagctagcctagcctagctggtctatgaaaagggctaagtgggaaag 538
Query: 61 atcaacagccttaagtttgcagataagaaactccaaacctagcttcttcaaatactcctc 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 537 atcaacagccttaagtttgcagataagaaactccaaccctagcttcttcaaatactcctc 478
Query: 121 caccaatatggagggcaaaataaactagtgagctatatacatttgtgtctccctagcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 caccaatatggagggcaaaataaactagtgagctatatacatttgtgtctccctagcatt 418
Query: 181 tatcaaaaggagggaatgtagtgaaatgttaagcactgttaacaaacatcaaaatattag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 tatcaaaaggagggaatgtagtgaaatgttaagcactgttaacaaacatcaaaatattag 358
Query: 241 gggtaggactctctattaaaatgtcaaactatcaattctgcaataattcttttcactttt 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 357 gggtaggactctctattaaaatgtcaaactatctattctgcaataattcttttcactttt 298
Query: 301 gctggttttgatgactgctatcagctttttaaaaagccttttttaaaagtgtaaaatact 360
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 297 gctggttttgatgactgctatcagttttttaaaaagccttttttaaaagtgtaaaatact 238
Query: 361 tttttctaagaaaaaaagctagcacactacataaaat 397
|||||||||||||||||||||||||||||||||||||
Sbjct: 237 tttttctaagaaaaaaagctagcacactacataaaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 397
Length of database: 797
Length adjustment: 9
Effective length of query: 388
Effective length of database: 788
Effective search space: 305744
Effective search space used: 305744
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
