Query= MSMg01no368_b20.b1 MSMg01no368_b20.b1 CHROMAT_FILE:
MSMg01no368_b20.b1 PHD_FILE: MSMg01no368_b20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:28 2005
(586 letters)
>mm_chr5_136524674_136525659
Length = 986
Score = 862 bits (446), Expect = 0.0
Identities = 452/454 (99%)
Strand = Plus / Minus
Query: 133 gagtgtggtagttaatcctaacacttgggagatagaggcaggaaaatcacaggaccctgt 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986 gagtgtggtagttaatcctaacacttgggagatagaggcaggaaaatcacaggaccctgt 927
Query: 193 ctcaagaagagaacaaaagtaaatgatccacacagctttaatcccaacattcaagaggca 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 926 ctcaagaagagaacaaaagtaaatgatccacacagctttaatcccaacattcaagaggca 867
Query: 253 aggatattcagggatctctgagttcaaggccagcctggtctacatagtgagttccaggcc 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 aggatattcagggatctctgagttcaaggccagcctggtctacatagtgagttccaggcc 807
Query: 313 agccagggctacatagtaagtaagacattgtcctgctacgtccaaagaaacaaagtaaaa 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 agccagggctacatagtaagtaagacattgtcctgctacgtccaaagaaacaaagtaaaa 747
Query: 373 aacctctttacaacctggttggtgctagagactcatcccaaggtttctagtgctcctgct 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 aacctctttacaacctggttggtgctagagactcatcccaaggtttctagtgctcctgct 687
Query: 433 gtgtggaactctagggcaaaatgtcccctcagggtttgatggggcccagcacagcatcag 492
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gtgtggaactctggggcaaaatgtcccctcagggtttgatggggcccagcacagcatcag 627
Query: 493 ctaactgttctgggcaggaccactgacacctctgtgacacctcagccagcatagcctagg 552
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ctaactgttctgggcaggaccactgacacctctgtgacacctcagccagcatagcctagg 567
Query: 553 acaggagatcaccagtgggtggcttctgacgatg 586
|||||||||||||||||||||||||||||||||
Sbjct: 566 gcaggagatcaccagtgggtggcttctgacgatg 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space: 562176
Effective search space used: 562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_b20.g1 MSMg01no368_b20.g1 CHROMAT_FILE:
MSMg01no368_b20.g1 PHD_FILE: MSMg01no368_b20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:28 2005
(341 letters)
>mm_chr5_136374336_136375076
Length = 741
Score = 586 bits (303), Expect = e-172
Identities = 328/345 (95%), Gaps = 16/345 (4%)
Strand = Plus / Plus
Query: 1 cacccacttagttaactctaacccacactgtcatagctccggacatcaaaatccctcttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacccacttagttaactctaacccacactgtcatagctccggacatcaaaatccctcttt 260
Query: 61 ttgttgttgtattttgcttgtttattagacttttaaaaactaatagacctgacttactgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgttgttgtattttgcttgtttattagacttttaaaaactaatagacctgacttactgg 320
Query: 121 atagatagatagatagatagatagatagatagatagatagatagatagatagatagatag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atagatagatagatagatagatagatagatagatagatagatagatagatagatagatag 380
Query: 181 atagatagatagatagatgaatgatagctagactttcacatagcccgggctggtctccaa 240
|||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atagatagat--------gaatgatagctagactttcacatagcccgggctggtctccaa 432
Query: 241 tttgttatatattttgt----gtatgaccttgaactactgaccctcctgcttccacctgc 296
||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tttgttatata----gcaggagtatgaccttgaactactgaccctcctgcttccacctgc 488
Query: 297 tgagtttgggaattacaaatttggtcatcgtccctgacttaagga 341
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tgagtttgggaattacaaatttggtcatcgtccctgacttaagga 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 66
Number of extensions: 24
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 741
Length adjustment: 9
Effective length of query: 332
Effective length of database: 732
Effective search space: 243024
Effective search space used: 243024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
