Query= MSMg01no368_d15.b1 MSMg01no368_d15.b1 CHROMAT_FILE:
MSMg01no368_d15.b1 PHD_FILE: MSMg01no368_d15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:36 2005
(624 letters)
>mm_chr5_52239632_52240655
Length = 1024
Score = 835 bits (432), Expect = 0.0
Identities = 447/452 (98%)
Strand = Plus / Minus
Query: 173 aatgggaaaagcattggcctgagagtgagacaggcctgggcattgctccaaagtctgcca 232
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1024 aatgggaaaagcattggcctgggagtgagacaggcctgggcattgctccaaagtctgcca 965
Query: 233 tttgctagctgtgtaaccccttgcaaatcacccctcagagcctcagtttacttctctgca 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 964 tttgctagctgtgtaaccccttgcaaatcacccctcagagcctcagtttacttctctgca 905
Query: 293 cagcagggctttatttaatgcctccctctgaagacagttcatagattggatgtacaaatg 352
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 cagcagggctttagttaatgcctccctctgaagacagttcatagattggatgtacaaatg 845
Query: 353 cctggtctagtacctggcacctgctggaggttggatgttatttctttcctctcattcttg 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 cctggtctagtacctggcacctgctggaggttggatgttatttctttcctctcattcttg 785
Query: 413 tctaagctggcattggctccactgagatgagatgtcacttcagctcagaactggagaaca 472
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 784 tctaagctggcattggctccactgagatgagatgttacttcggctcagaactggagaaca 725
Query: 473 tcatttcattcttcattcaccaacctgagacactatagctttgttagacttttggaagta 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 tcatttcattcttcattcaccaacctgagacactatagctttgttagacttttggaagta 665
Query: 533 catatgcacatgtagagacagatagctgtgtaggaatctctgttcacctcttgaagagtt 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 catatgcacatgtagagacagatagctgtgtaggaatctctgttcacctcttgaagagtt 605
Query: 593 gaacatggctagaatatgcatttatttataag 624
||||||||||||||||||||||||||| ||||
Sbjct: 604 gaacatggctagaatatgcatttatttctaag 573
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no368_d15.g1 MSMg01no368_d15.g1 CHROMAT_FILE:
MSMg01no368_d15.g1 PHD_FILE: MSMg01no368_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:37 2005
(569 letters)
>mm_chr5_52104502_52105471
Length = 970
Score = 1087 bits (562), Expect = 0.0
Identities = 568/570 (99%), Gaps = 1/570 (0%)
Strand = Plus / Plus
Query: 1 tttctagagaaggtaagttaagcatgaatggaccaatgtggtgtcccacggaattggggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttctagagaaggtaagttaagcatgaatggaccaatgtggtgtcccacggaattggggc 260
Query: 61 tcagacaggattgcagcaggacttggcagcatcaatgaaatgcctctcatcctaaatggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcagacaggattgcagcaggacttggcagcatcaatgaaatgcctctcatcctaaatggt 320
Query: 121 tcctgagaaaa-tagagcaatctgagccaatgggatttataagagaggaatttcagcatt 179
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcctgagaaaaatagagcaatctgagccaatgggatttataagagaggaatttcagcatt 380
Query: 180 gctattggtggggttttttatttttatcatttcagtcaggctatccacagagctcacatc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctattggtggggttttttatttttatcatttcagtcaggctatccacagagctcacatc 440
Query: 240 cttcactgtccaatgctcacactcaatctcacgctcacctctcacccatcatcagtcaac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttcactgtccaatgctcacactcaatctcacgctcacctctcacccatcatcagtcaac 500
Query: 300 tcatttgcagtcactgtttgctttttaaaatctgttttgttttcttttcaactctcagaa 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcatttgcagtcactgtttgctttttaaaatctgttttgttttcttttcaactctcagaa 560
Query: 360 cagaacttagggccttatagatagtagtctaatgagcttcactaactagaaccttagccc 419
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cagaacttagggcctcatagatagtagtctaatgagcttcactaactagaaccttagccc 620
Query: 420 tcagccaagttacttgatacattaattttggctagagaaacttaagatatcttcctgtct 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcagccaagttacttgatacattaattttggctagagaaacttaagatatcttcctgtct 680
Query: 480 ttactgagtgtatgggcatcttcacatgtagagaggagatgacactctgccctttgagtg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttactgagtgtatgggcatcttcacatgtagagaggagatgacactctgccctttgagtg 740
Query: 540 cctttattaagggaagtctgaagtatccat 569
||||||||||||||||||||||||||||||
Sbjct: 741 cctttattaagggaagtctgaagtatccat 770
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 569
Length of database: 970
Length adjustment: 10
Effective length of query: 559
Effective length of database: 960
Effective search space: 536640
Effective search space used: 536640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
