Query= MSMg01no370_c13.b1 MSMg01no370_c13.b1 CHROMAT_FILE:
MSMg01no370_c13.b1 PHD_FILE: MSMg01no370_c13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:06 2005
(604 letters)
>mm_chr5_80566496_80567500
Length = 1005
Score = 1154 bits (597), Expect = 0.0
Identities = 600/601 (99%), Gaps = 1/601 (0%)
Strand = Plus / Plus
Query: 5 gaattcaccattttcaccttgtaacaaattcagcaatgctgcaaaattaccaggcaaccc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaccattttcaccttgtaacaaattcagcaatgctgcaaaattaccaggcaaccc 264
Query: 65 aatttcttagggttacagcaatgtcacagataattaaatagaaactggggttttgtcctg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatttcttagggttacagcaatgtcacagataattaaatagaaactggggttttgtcctg 324
Query: 125 gtttcaataaattggccagctggaccaccagcaacatccctctgtgcagccgcaaaggtc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtttcaataaattggccagctggaccaccagcaacatccctctgtgcagccgcaaaggtc 384
Query: 185 tagcagcatgctaataaaagcctcagggagatcgcacacactattggccattttctacaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tagcagcatgctaataaaagcctcagggagatcgcacacactattggccattttctacaa 444
Query: 245 gagctatggttttgggcaaattggggatatgtattagcattcttgttccattgcattgag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gagctatggttttgggcaaattggggatatgtattagcattcttgttccattgcattgag 504
Query: 305 cacaagaagacaaggcgtaccttatgagggtgtgttaagtagccctgaaagtattgaaaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cacaagaagacaaggcgtaccttatgagggtgtgttaagtagccctgaaagtattgaaaa 564
Query: 365 ctaatgagacaaacagaaaaaaaaa-tataattcttattcaacctcattctatagaacag 423
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 565 ctaatgagacaaacagaaaaaaaaaatataattcttattcaacctcattctatagaacag 624
Query: 424 caaatctgacaatggcatcagttgtttgtaatgcttcaaagaaaaaccatatttccactt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 caaatctgacaatggcatcagttgtttgtaatgcttcaaagaaaaaccatatttccactt 684
Query: 484 caattaaaataaaagataattctgtgctgctttgatattcatagtcaagaatattttccc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 caattaaaataaaagataattctgtgctgctttgatattcatagtcaagaatattttccc 744
Query: 544 aaccatatttttatgaaactaactttttaatacctggagtttttgctttaactttacaat 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aaccatatttttatgaaactaactttttaatacctggagtttttgctttaactttacaat 804
Query: 604 t 604
|
Sbjct: 805 t 805
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 604
Length of database: 1005
Length adjustment: 10
Effective length of query: 594
Effective length of database: 995
Effective search space: 591030
Effective search space used: 591030
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_c13.g1 MSMg01no370_c13.g1 CHROMAT_FILE:
MSMg01no370_c13.g1 PHD_FILE: MSMg01no370_c13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:08:07 2005
(389 letters)
>mm_chr5_80744797_80745585
Length = 789
Score = 704 bits (364), Expect = 0.0
Identities = 381/390 (97%), Gaps = 7/390 (1%)
Strand = Plus / Minus
Query: 1 tgggccaaccagtattaaataggaaaatggttgatctcaaacaaataaactaacaaaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 tgggccaaccagtattaaataggaaaatggttgatctcaaacaaataaactaacaaaaac 723
Query: 61 caaaaatgaatattgaaagtatgctttagtaatttttt--ttctgtgtttgattcatgaa 118
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 722 caaaaatgaatattgaaagtatgctttagtaatttttttcttctgtgtttgattcatgaa 663
Query: 119 gaaactgatcatctttttacagaagtacctgcacacctctgtttcctgctgcactcttcg 178
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gaaactgatcatctttttacagaagtacctgcacacctctgtttcctgctgcactcttc- 604
Query: 179 catggcatggcatggcatgatgcatggtggccataatctgatgaatgaatgaagacatta 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ----gcatggcatggcatgatgcatggtggccataatctgatgaatgaatgaagacatta 548
Query: 239 tcatgcagatgcggcaaagagcattactcagacttaaagaaagattagagtatgctaatt 298
||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 547 tcatgcagatgtggcaaagagcattactcagacttaaggaaagattagagtatgctaatt 488
Query: 299 tcagaaaaaaaagatagaagtggatttcattataaagacaaaactgattattcctgaaga 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tcagaaaaaaaagatagaagtggatttcattataaagacaaaactgattattcctgaaga 428
Query: 359 cagagtcatctgtggaatatatagataaaa 388
||||||||||||||||||||||||||||||
Sbjct: 427 cagagtcatctgtggaatatatagataaaa 398
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 789
Length adjustment: 9
Effective length of query: 380
Effective length of database: 780
Effective search space: 296400
Effective search space used: 296400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
