Query= MSMg01no370_n20.b1 MSMg01no370_n20.b1 CHROMAT_FILE:
MSMg01no370_n20.b1 PHD_FILE: MSMg01no370_n20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:02 2005
(452 letters)
>mm_chr5_26721734_26722585
Length = 852
Score = 727 bits (376), Expect = 0.0
Identities = 430/448 (95%)
Strand = Plus / Minus
Query: 5 gaattcagagacccatgtttaccagtcaatgtcactgagctgcctttgcatcttcaagta 64
||||||||||||||||| |||||||||||| |||||||||||||||| |||||||| |||
Sbjct: 652 gaattcagagacccatgcttaccagtcaatttcactgagctgcctttccatcttcatgta 593
Query: 65 gaattatttttaatgacatgcctgctatgtgtagatcatgagaactccctcatgtagacc 124
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 592 gaattatttttaatgacatgcctgctatgtgtagatcatgagaaccccctcatgtagacc 533
Query: 125 aagtacacaatgaaagtagaaccaatggatgtcagggttttggggttgcctctgttttca 184
||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct: 532 aagtacacaatgaaagtagtgccaatggatgtcagggttttggggttgcctctcttttca 473
Query: 185 gcattagactctcctctttttaatgggcccagactgtacatgccattcatagtaataaag 244
|||||||||||| |||||||||| | ||||||||||||||||||||||||||||| ||||
Sbjct: 472 gcattagactcttctctttttaaagtgcccagactgtacatgccattcatagtaacaaag 413
Query: 245 gcaatttttcaacacagctttggttaattttcttctgtgtaaaccataagtctgcctgtc 304
||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 412 gcaatttgtcaacacagctttggttaattttcttctgtgtaaaccataagcctgcctgtc 353
Query: 305 tttctgaggtggttagtatattgcaaggccttttagcttggattatgccattgctaagtg 364
|||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||
Sbjct: 352 tttctgaggtggttagtacattgcaaggccttttagcttggattatgccatcactaagtg 293
Query: 365 ttataggcagaattctgttcccttacccaaatgtttcagaccgtaaatctctaacctaag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ttataggcagaattctgttcccttacccaaatgtttcagaccgtaaatctctaacctaag 233
Query: 425 acacccatcggcttgtggctgtgttcag 452
||||||||||||||||||||||| ||||
Sbjct: 232 acacccatcggcttgtggctgtgctcag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no370_n20.g1 MSMg01no370_n20.g1 CHROMAT_FILE:
MSMg01no370_n20.g1 PHD_FILE: MSMg01no370_n20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:03 2005
(344 letters)
>mm_chr5_26563960_26564703
Length = 744
Score = 625 bits (323), Expect = 0.0
Identities = 335/339 (98%), Gaps = 2/339 (0%)
Strand = Plus / Plus
Query: 1 ctggagaagatagcttcaaaaggatgattataaatatgctcaagggtttaaaggaaacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctggagaagatagcttcaaaaggatgattataaatatgctcaagggtttaaaggaaacaa 260
Query: 61 ggtctaataggtaaaaatctcatgaagaaacagagaggaaaaaatgaacgacatggagaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtctaataggtaaaaatctcatgaagaaacagagaggaaaaaatgaacgacatggagaa 320
Query: 121 atctcctgaaagacacattccaggtgggtggggcttacactgcccaatg-cttgcttttg 179
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 321 atctcctgaaagacacattccaggtgggtggggcttacactgcccaatgtct-gcttttg 379
Query: 180 ttgctttaaataccccttttcattttctcctggttttcattatttataaaatcagtaaca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttgctttaaataccccttttcattttctcctggttttcattatttataaaatcagtaaca 439
Query: 240 tttgcataatgtgcttgtctttcttttggcttatttttcaattgtttgcatatgcatgct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tttgcataatgtgcttgtctttcttttggcttatttttcaattgtttgcatatgcatgct 499
Query: 300 tctatgcgttcatgtgtgcctcatgtgtgtaatccccac 338
|||||| ||||||||||||||||||| ||||||||||||
Sbjct: 500 tctatgtgttcatgtgtgcctcatgtatgtaatccccac 538
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
