Query= MSMg01no371_d18.b1 MSMg01no371_d18.b1 CHROMAT_FILE:
MSMg01no371_d18.b1 PHD_FILE: MSMg01no371_d18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:35 2005
(182 letters)
>mm_chr5_46743557_46744138
Length = 582
Score = 329 bits (170), Expect = 7e-95
Identities = 179/182 (98%)
Strand = Plus / Plus
Query: 1 agaacacagctgtaaggatgtgcacaggaactgaggtgggcttagtgtagaaagggtgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaacacagctgtaaggatgtgcacaggaactgaggtgggcttagtgtagaaagggtgtt 260
Query: 61 ggactgcagcacccttctccagttctcagctcacaaacagccactcttggcttttctctg 120
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggacagcagcacccttctccagttctcagctcacaaacagccactcttggcttttctctg 320
Query: 121 tcattcttcaatccacctgtcatcaagttctgttagaatcctttttctcacatttcttcc 180
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 321 tcattcttcaatccacctgtcatcaagttctgttagtatcctctttctcacatttcttcc 380
Query: 181 ca 182
||
Sbjct: 381 ca 382
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 182
Length of database: 582
Length adjustment: 8
Effective length of query: 174
Effective length of database: 574
Effective search space: 99876
Effective search space used: 99876
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no371_d18.g1 MSMg01no371_d18.g1 CHROMAT_FILE:
MSMg01no371_d18.g1 PHD_FILE: MSMg01no371_d18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:35 2005
(277 letters)
>mm_chr14_18244789_18245467
Length = 679
Score = 484 bits (250), Expect = e-141
Identities = 272/280 (97%), Gaps = 4/280 (1%)
Strand = Plus / Plus
Query: 1 gccatgtgtcaca-aattaattaactaaaacccagtagctcagctccttactggtcaatg 59
||||||| ||| | |||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 201 gccatgtatca-agaattaattaactaaaacccagtagctaagctccttactggccaatg 259
Query: 60 gatgcttcacaca--tttttttttcttcagctccatcctagtctgggctctgtcttcgca 117
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gatgcttcacacatttttttttttcttcagctccatcctagtctgggctctgtcttcgca 319
Query: 118 ctggaagcatttccattggtttgtgcatcagttcaaagtctggggatgctcccacagtgt 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctggaagcatttccattggtttgtgcatcagttcaaagtctggggatgctcccacagtgt 379
Query: 178 tactctaaattttacatgtgttttatagagtagagcatattcttggctataggtgccttt 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tactctaaattttacatgtgttttatagagtagagcatattcttggctataggtgccttt 439
Query: 238 cttcttaaacactgtccttaattatttgagcttatgttga 277
||||||||||||||||| ||||||||||||||||||||||
Sbjct: 440 cttcttaaacactgtccataattatttgagcttatgttga 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 679
Length adjustment: 9
Effective length of query: 268
Effective length of database: 670
Effective search space: 179560
Effective search space used: 179560
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
