NTTTTTTTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCG
AATGGCAGTGATGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGG
AAATGCAAATCAAAACAACCTGAGATTCCACCTCACACCAGTCAGAATGA
CTAAGATCCAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATGTGGAGA
AAGAGAAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCAC
TCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACTG
GAGGATCCCAAACTCTATTCTTATCAGCTGATTTACTTATTTACTAATCC
CTTTTTACTCTTATTTGAACATACTGTTATTTTTCAACTGATATTTTCCA
TCGTGATATAATATGGCTAANACTGTGGTGAGTGAAACCTCAATTAAGAA
ATATAATATTGTAATTCATACAACAAAAACTTTAAAGCTTTGCTTTATTA
CATTGCTAAAACTGAAAGCTATCTTAAAGCTATTAAAATTTTTCCTAAAG
CATAAAGAAACCTCTGAAAAAAAATAATAAAAATGGGGCCTGGAAAATGA
ATGCTCCTGGTAAAAAATTTTTTAAAAAAAGTTCAAAACATTTTTTGGTA
AAGGGTATTTTAATTGTGTTAAAAATCGTGAAAAAAAAGGGGAGATAAAA
AATCTTTTTATTTA

NTTTTTGTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAT
CCGCGGAATTCATATCATCTGTGCCGTGAAGCATGCATCTCTGCTTTCTG
TGCGGGAAGAATTCTTTGATGGGCTGATGGACACTAACTGTTTATTAATT
CACCTGCACATCTACTGCACAGCTTCGGTCTGGCTTCTTCTCTGTATGGC
TTCATTTTTGCATTTGCCCATACTTGAAGAGGGCATCTAAGTATATTTAC
AAGGGAAGACATGTGGGAGTTGGTTATTACGATGTTGAATGCAAACTTTA
GATACATGAGTACTCTTTAAGGGTCAAAAGAAACAGAAGTGATCTTACAT
AGATAGGTTCCTACTGTAGCAGTAGAAAGTACTTGGAATTTTAATAGACT
CTGGTTATTATGTTTGGATTAACCTTTACCTATCACCAGCATCTTTCCCT
CTTTCTTTTTTTCCATCAGAATTTGGGTTTCTATACTATCTAATCATTTT
GGTGTGTGTGTGTGTGTGCGTGTGTGTGCCTGTGTCCGTGGGGTTTAAAT
GGGGCAACACATTAAAGGAAAAAATTGCCTGTGATTTTTAAAAAAAAAAA
TGGAGTGATATATAATAAAATTTTGGTGATGTATACAAAAATAAGGAATA
TTGGCACATTTTCTTCCTCTTCATTCTTATTTTATTCATTCTCTAATTTA
CTCCTTGTCACTTCTTTGTCATCATTTACTTCCTATTGACCCTAAACCTT
CACCACTACCTTTCATCTTTCCTTTAT

Query= MSMg01no371_d23.g1 MSMg01no371_d23.g1 CHROMAT_FILE:
MSMg01no371_d23.g1 PHD_FILE: MSMg01no371_d23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:36 2005
         (420 letters)



>mm_chr5_83435923_83436743
          Length = 821

 Score =  787 bits (407), Expect = 0.0
 Identities = 413/415 (99%), Gaps = 1/415 (0%)
 Strand = Plus / Minus

                                                                       
Query: 7   gaattc-atatcatctgtgccgtgaagcatgcatctctgctttctgtgcgggaagaattc 65
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaattcaatatcatctgtgccgtgaagcatgcatctctgctttctgtgcgggaagaattc 562

                                                                       
Query: 66  tttgatgggctgatggacactaactgtttattaattcacctgcacatctactgcacagct 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttgatgggctgatggacactaactgtttattaattcacctgcacatctactgcacagct 502

                                                                       
Query: 126 tcggtctggcttcttctctgtatggcttcatttttgcatttgcccatacttgaagagggc 185
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcggtctggcttcttctctgtacggcttcatttttgcatttgcccatacttgaagagggc 442

                                                                       
Query: 186 atctaagtatatttacaagggaagacatgtgggagttggttattacgatgttgaatgcaa 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atctaagtatatttacaagggaagacatgtgggagttggttattacgatgttgaatgcaa 382

                                                                       
Query: 246 actttagatacatgagtactctttaagggtcaaaagaaacagaagtgatcttacatagat 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actttagatacatgagtactctttaagggtcaaaagaaacagaagtgatcttacatagat 322

                                                                       
Query: 306 aggttcctactgtagcagtagaaagtacttggaattttaatagactctggttattatgtt 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aggttcctactgtagcagtagaaagtacttggaattttaatagactctggttattatgtt 262

                                                                  
Query: 366 tggattaacctttacctatcaccagcatctttccctctttctttttttccatcag 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggattaacctttacctatcaccagcatctttccctctttctttttttccatcag 207


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 821
Length adjustment: 9
Effective length of query: 411
Effective length of database: 812
Effective search space:   333732
Effective search space used:   333732
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)