Query= MSMg01no371_f22.b1 MSMg01no371_f22.b1 CHROMAT_FILE:
MSMg01no371_f22.b1 PHD_FILE: MSMg01no371_f22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:47 2005
(355 letters)
>mm_chr5_29262381_29263135
Length = 755
Score = 671 bits (347), Expect = 0.0
Identities = 353/355 (99%)
Strand = Plus / Minus
Query: 1 ctatttatgacaattgctcttcagattcttctgatttgcacaacttaatcccctgctaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 ctatttatgacaattgctcttcagattcttctgatttgcacaacttaatcccctgctaag 496
Query: 61 tgatgagctccttaagtccccctttctaatgtattccacatggtctctgtgatgaagccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 tgatgagctccttaagtccccctttctaatgtattccacatggtctctgtgatgaagccg 436
Query: 121 ggtgcagtgatggctcagtgactgtcttaatagctgattgccaggcacccttggagaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ggtgcagtgatggctcagtgactgtcttaatagctgattgccaggcacccttggagaaca 376
Query: 181 ctacacagggctcaccacgtgccaggtgcctgcttctctgcagcattgtgggagtgtaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ctacacagggctcaccacgtgccaggtgcctgcttctctgcagcattgtgggagtgtaat 316
Query: 241 ctctgtctgaccgtgttcaatgctttcccttgtgtttgatcactgctattgtgtgttctt 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ctctgtctgaccatgttcaatgctttcccttgtgtttgatcactgctattgtgtgttctt 256
Query: 301 cccattgctgtggtttctccatgattgctctagaggtctccatgttaaagcatgg 355
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 255 cccattgctgtggtttctccatgattgctctagaggtctctatgttaaagcatgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 355
Length of database: 755
Length adjustment: 9
Effective length of query: 346
Effective length of database: 746
Effective search space: 258116
Effective search space used: 258116
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no371_f22.g1 MSMg01no371_f22.g1 CHROMAT_FILE:
MSMg01no371_f22.g1 PHD_FILE: MSMg01no371_f22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:09:47 2005
(435 letters)
>mm_chr5_29142683_29143517
Length = 835
Score = 679 bits (351), Expect = 0.0
Identities = 419/449 (93%), Gaps = 18/449 (4%)
Strand = Plus / Plus
Query: 5 gaattccacatgcatatgcatgtctcctagcatcaatttgagattcctgtcagaactgga 64
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccacatgcacatacatgtctcctagcatcaatttgagattcctgtcagaactgga 264
Query: 65 atacatggccttgtcaaagtcctcaccatctcttaaatagtactgctctccacccagcag 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctacatggccttgtcaaagtcctcaccatctcttaaatagtactgctctccacccagcag 324
Query: 125 ttagagccagagcttcaggaacctcctccttcgtgtccctttctccctcctccctcctcc 184
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 325 ttagagccagagcttcaggaacctcctccttcatgtccctttctccctcctccctcctcc 384
Query: 185 ctccctcct-------tccctttcctcctctccttccctcccttccccctcctcttcctt 237
||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 385 ctccctcctccctccttccctttcctcctctccttccctcccttccccttcctcttcctt 444
Query: 238 cctccctcctcctgcctccatcatccttcctccttcctcccttccctttcctcctccctc 297
||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||
Sbjct: 445 cctccctcctcctgcctccctcatccctcctccttcctcccttccctttcctcctccctc 504
Query: 298 cttcctctttcctccccc---ctccctccttccctttccctctcctccctcctctctcct 354
||||||||| |||||||| |||||||||||||||||| ||||||||||||||||| ||
Sbjct: 505 cttcctcttccctccccctccctccctccttccctttccttctcctccctcctctcttct 564
Query: 355 ccctccactctcttcccttcctcttcttc--tc--tccctccttccctccctccctctct 410
|||||||||||||||||||||||| |||| || ||||||| |||||||||||||||||
Sbjct: 565 ccctccactctcttcccttcctctccttccctccttccctccctccctccctccctctct 624
Query: 411 ccctccctct--ctctctc-c-ctccctc 435
|||||||||| ||||||| | |||||||
Sbjct: 625 ccctccctctttctctctctctctccctc 653
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 73
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space: 351876
Effective search space used: 351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
