Query= MSMg01no372_i16.b1 MSMg01no372_i16.b1 CHROMAT_FILE:
MSMg01no372_i16.b1 PHD_FILE: MSMg01no372_i16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:18 2005
(582 letters)
>mm_chr5_3060332_3061313
Length = 982
Score = 1058 bits (547), Expect = 0.0
Identities = 571/579 (98%)
Strand = Plus / Plus
Query: 4 ggaattcaatttttccccaacatattagatgttacaggcagagcagagtcatataacgtt 63
||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaattgttctgcaacatattagatgttacaggcagagcagagtcatataacgtt 263
Query: 64 atctgtatcctgtgtaggctcaccagctaatgtacaaggattggacagtgttccagtacc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atctgtatcctgtgtaggctcaccagctaatgtacaaggattggacagtgttccagtacc 323
Query: 124 acagtcacagaaaaacctatcaggtctaatgaattctacacatgatgtcattttttaaca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acagtcacagaaaaacctatcaggtctaatgaattctacacatgatgtcattttttaaca 383
Query: 184 gccaagtaatactcaattgtgtaaatgtaccacagtttctttattccttcttctgttaaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gccaagtaatactcaattgtgtaaatgtaccacagtttctttattccttcttctgttaaa 443
Query: 244 ggacacataggctattttcagtttctggttaatataattagagcaaaaataacatagttg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggacacataggctattttcagtttctggttaatataattagagcaaaaataacatagttg 503
Query: 304 agcatgtctttatggtaaaattaagcatcctcagggtatagatccaagttggatcttgaa 363
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agcatgtccttatggtaaaattaagcatcctcagggtatagatccaagttggatcttgaa 563
Query: 364 gtagattgattctcaacttcctgaggaaccaccatattgattctaataatggaagtgcaa 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gtagattgattctcaacttcctgaggaaccaccatattgattctaataatggaagtgcaa 623
Query: 424 gtttgcactcccaccagtaacggaggactgttcttcctgttccataacctcacttctgtt 483
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gtttgcactcccaccagcaacggaggactgttcttcctgttccataacctcacttctgtt 683
Query: 484 gttgatttctgataggtctgtctttttaagttcctctgccatttcccttgcagttttgaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gttgatttctgataggtctgtctttttaagttcctctgccatttcccttgcagttttgaa 743
Query: 544 tattctcttttagatttgtgtacttagcgctttgattgt 582
||||||||||||| ||||||||||||| | |||||||||
Sbjct: 744 tattctcttttagttttgtgtacttagtgttttgattgt 782
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space: 555984
Effective search space used: 555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no372_i16.g1 MSMg01no372_i16.g1 CHROMAT_FILE:
MSMg01no372_i16.g1 PHD_FILE: MSMg01no372_i16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:11:19 2005
(466 letters)
>mm_chr5_3225602_3226467
Length = 866
Score = 893 bits (462), Expect = 0.0
Identities = 465/466 (99%)
Strand = Plus / Minus
Query: 1 ttcatcacgtgtcctttcacgtgcttgccttagcagaacatctctctcctgtgtctgctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 ttcatcacgtgtcctttcacgtgcttgccttagcagaacatctctctcctgtgtctgctt 794
Query: 61 cagtgaaacgttcctttacaagtctgccttagtctttcaccagtgttcacttcaggaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 cagtgaaacgttcctttacaagtctgccttagtctttcaccagtgttcacttcaggaaaa 734
Query: 121 cactccttcacatgtgcgccccagtcaaacatcatctaacacaactgactctacaaagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 cactccttcacatgtgcgccccagtcaaacatcatctaacacaactgactctacaaagaa 674
Query: 181 cacttaaacatctgttttagctttgcaagtagacgtcttcagcagataaagggcacagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 cacttaaacatctgttttagctttgcaagtagacgtcttcagcagataaagggcacagtg 614
Query: 241 ggcactcaggggtccctgcttactgcaaacccagttgtgttgactatttaactgtgtggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ggcactcaggggtccctgcttactgcaaacccagttgtgttgactatttaactgtgtggt 554
Query: 301 acatgaattgactttgagaaaagcaaaaagcttcactttcttcctggtgtttttgggagg 360
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 553 acatgaattgactttgagaaaagcaaaacgcttcactttcttcctggtgtttttgggagg 494
Query: 361 gtaagctaatttcacatgtgccaatgctcttagagatctgagtttcagagccagcacgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 gtaagctaatttcacatgtgccaatgctcttagagatctgagtttcagagccagcacgta 434
Query: 421 ctaaccctgaaggaatccaacacacaacaaatacccagttatgtgt 466
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ctaaccctgaaggaatccaacacacaacaaatacccagttatgtgt 388
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
