ACTCCTATAGTCAGAGGATCCGCGGAATTCCACCTATTTTGCATATATAC
TTCTACCCCCCCAACTTTTTGTTTTATATTTCAGTGTGATGTTATGGGAC
ATTATGCCTTAGTTTTCAAAACTTTCTTCTCATCCATGAACTCAAAAAAA
AAAGAGAGAGAAATATATTCTGAAACTGCATCATACTATTAAAAAAATAA
AGTTTTATTGGCTAAAGAGAGGGCTCAGAGGTTAAGAGCACTGAGTGTTC
TTCCAGGGTCCTGAGGTCAACTCACAGCAAACATATGGTGGTTCACAACC
ATCTGTAATGAAATCTGATGACCTCTCCTGGTGTGTCTGAAAATAGCTAC
GGTGTACTGAAATATATAAAATAAGTAATTCTTTTTTTAAAAGTAAAGTT
TTAAGTCTAAAGATAGGATAATGTGGCAGAATGATTATCTAGCAAGCATA
CTACATGTTCATTCNAGGACAAAAACAAACAAACAAGCAAACAAACAACC
AGTAAAAGATCTTTGCAAGATTATATGCCCCCCGTACAGGATAATGCCAG
GGCCAGGAAACAGGAATGGGTGGGTTTGGTAANAAAGAAANAACAAGGTA
ATAAGGGATTTTTGGTTATAAACTTGACACGCTAATGACATAATTTTTTC
TTATATATTTATTTTTACTCCCTCCCGCCTTCATATATAACCATGGGGTG
TGGGTAATTTTTTTTTTTCTTTTTTTTTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGATTCTATGTGTCTCGACCTTTTGCTGAGGAAGGGCTTCTCCACCTGG
ATTTCCTCTGCATTTTCCTACTTTAAGGAGTGGGTGGGGGTAGGCTTGTT
TGCCGTGATCCTATGTGGTGGAGCATTGCTTTTGCTCTGGATGGTCTGTA
AACTTAAAGCACAAACAAAAAGGGACAAGATGGTAATATCCCAAGCACTT
GCAGCATTAGAACACGGTGCCTCCCCTGATATATGGTTATCTATACTTAA
GCAATATTTCTTTGTCCACTCAGCTCTTAGACCCCACGAGGCTAGTCTCA
CTGCACGGGACAGAGTGAGTGTGCTTCAGCAGCCTGAGAGAGTTGCATGG
CTACCCACTGCATTATAAAGGCTCTGCGGTATAAAATGAGTCTATTCTAG
GCAGACCTGTCCTCTTGCACGACCGTTGCATGTCCCACGGTCCTTCCCCC
CCATAACCTCTCTTGTTATCATACTACTCCCCTTTCTGCCCACTACCCTG
ATCCAATGTCTTTCCCGCAATCTCCCCTTTTTTCCCCCATTCTAATATTA
TTTTTTCCTCCCCCCTTCTCTCTTCATTCCTTTTTTTCTTTCTTCTTTCT
CTTTCTTTTCTTACTCTTACTAAACATCCCCCCTTTCCCATTACATTTAT
AATTTTTTTCTTCTATCCCTCCTCCATCATTCATTTTTTCG

Query= MSMg01no373_j23.b1 MSMg01no373_j23.b1 CHROMAT_FILE:
MSMg01no373_j23.b1 PHD_FILE: MSMg01no373_j23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:37 2005
         (446 letters)



>mm_chr5_60160526_60161371
          Length = 846

 Score =  702 bits (363), Expect = 0.0
 Identities = 381/387 (98%), Gaps = 2/387 (0%)
 Strand = Plus / Minus

                                                                       
Query: 10  tccacctattttgcatatatacttctacccccccaactttttgttttatatttcagtgtg 69
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 390 tccacctattttgcatatatacttcta-ccccccaactttttgttttatatttcagtgtg 332

                                                                       
Query: 70  atgttatgggacattatgccttagttttcaaaactttcttctcatccatgaactc-aaaa 128
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 331 atgttatgggacattatgccttagttttcaaaactttcttctcatccatgaactcaaaaa 272

                                                                       
Query: 129 aaaaaagagagagaaatatattctgaaactgcatcatactattaaaaaaataaagtttta 188
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aaaaaagagagagaaatatattctgaaactgcatcatactattaaaaaaataaagtttta 212

                                                                       
Query: 189 ttggctaaagagagggctcagaggttaagagcactgagtgttcttccagggtcctgaggt 248
           |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 211 ttggctaaagagagggctcagaggttaagagcactgagtgttcttccaaggtcctgagtt 152

                                                                       
Query: 249 caactcacagcaaacatatggtggttcacaaccatctgtaatgaaatctgatgacctctc 308
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 151 caactcacagcaaccatatggtggttcacaaccatctgtaatgaaatctgatgacctctt 92

                                                                       
Query: 309 ctggtgtgtctgaaaatagctacggtgtactgaaatatataaaataagtaattctttttt 368
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91  ctggtgtgtctgaaaatagctacggtgtactgaaatatataaaataagtaattctttttt 32

                                      
Query: 369 taaaagtaaagttttaagtctaaagat 395
           |||||||||||||||||||||||||||
Sbjct: 31  taaaagtaaagttttaagtctaaagat 5


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 446
Length of database: 846
Length adjustment: 10
Effective length of query: 436
Effective length of database: 836
Effective search space:   364496
Effective search space used:   364496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)