NNNACTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGGATCC
GCGGAATTCCTTTCAACCTGCTTCAAGTATCCTAGTTAGCTTTCTATTGC
TGTGATAAAACACCAGGACCTAAGGCAACTTGAGACGTAAGGGTTTTAAT
TGGCTTACAACTTATAGGCCATCACAGAAGGAAGTCAAGGCAGGAACCTG
AAGGCAGGAACTAGAGCACAGACCATAGAGGAGGACTGCTTACTAGTTTG
CTCCTCATGGTTCACTCAGCCTGCTTTCTTATAGCACCCAGGACCACAAT
CCCAGGGGTGGTGGTCCTGCCCAAGTGAGCTGGACCCTCCAACATCCATC
ATTAATCAAAAAATTATATATGCATGTGTGTGTGTGTGAGTGTGTGTGTG
TGTGTGTGTGTGTGTNTCCNCCCCCCCCCCCCCCCCTCCTCNCNTTTTCT
TTTCTTCCTTCCTCTCTTTTCTCTTTTTCCTTTCCTTCTTTTCTTTCCCT
CCTNTCCTCCTTCCTTTTTTTCCCCTTTTTCTCTCTCCTCTTTTTTTTCT
TCTCTCCCTCCCTTCTTTTTTTTCCCTTCCTCCTTTCCCCTTCTTTCCCC
TTTTTTCCCTCTCCTTCCTCTCTCCTCTTTTTCCTCCCTTTCTCCTTTTT
CTTTCCCCTCTCCTTTCTCCTTTTCTTTCTCCTCTCTTTTTCCTTCCCCC
CTCCTCTCCTCTTTCTTCCTTCCCTTTCTCTTCCTTCCTCTCCTTTTTTC
TCCCTCTCTTTTTNTTTCCCTTTTTTTCTCTTTTCT

NNNCCGATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCAGACCTTAGGCTTTGCAGCAAG
TTCTTTTAGCCATCTTGCTGGCATCTGTTTATTCTCTCTCTCTCTCTTTC
TCTCTCTCTCTCCCCCCAAGATACTTCCAGCTATTTATTTATTTATATTT
GTCCTTTGACAGTTGCAGTCATGTGTTGATAGAGGCAACAGGTCTTTTGT
TTGTTTATTTTTGCCTGAGACCCAAATTACCAGGAAGGACCGACTCCTGG
AGAAGAGTCACAGGCAGAGGAAAGGGGCCCCTTGCATCTCTCTGCAGGGT
GCCTGCGACACGAGGGCCCCTATGCTATGTCCGCTCACTCACGTGCTCGA
TCCTCATCCAACAATCACATATTCATCATCACTGGGCACTTGGGATGTGA
CAGGGGAGAGAGGGGCTGCTTCAGTCTCATGGGAGGGGCTGTCAGTCTCA
GAATCAAACAGCAAATTGAGGGAGAGATAAATACCCGCTTTTCGGCACAG
GGTAAGGTTGAGGTCACTTGTGTCCCTTCCCAAGGGGTTGATTTTGCTCC
TCCCCCCAAAGTTTGGAAATTGTTCCTTTATTCGGGGGAAGAAAAAAATA
CCCCCCCTATTTATTTCCCATGCTTTTGGGCCTTTCCCTTGTTGCGTTAA
TAAAACCCCTTTCCCATGGCTGTTTTCTTGTTTTAGTAAGGCATCTTCTC
TTTCCTATTTTCCTCGCCGTTA

Query= MSMg01no375_b23.g1 MSMg01no375_b23.g1 CHROMAT_FILE:
MSMg01no375_b23.g1 PHD_FILE: MSMg01no375_b23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:14:36 2005
         (420 letters)



>mm_chr5_126018817_126019640
          Length = 824

 Score =  770 bits (398), Expect = 0.0
 Identities = 413/420 (98%), Gaps = 4/420 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   ccttaggctttgcagcaagttcttttagccatcttgctggcatctgtttattctctctct 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ccttaggctttgcagcaagttcttttagccatcttgctggcatctgtttattctctctct 264

                                                                       
Query: 65  ctctctttctctctctctctccccccaagatacttccagctatttatttatttatatttg 124
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctctctttccctctctctctccccccaagatacttccagctatttatttatttatatttg 324

                                                                       
Query: 125 tcctttgacagttgcagtcatgtgttgatagaggcaacaggtcttttgtttgttt----a 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||    |
Sbjct: 325 tcctttgacagttgcagtcatgtgttgatagaggcaacaggtcttttgtttgtttgttta 384

                                                                       
Query: 181 tttttgcctgagacccaaattaccaggaaggaccgactcctggagaagagtcacaggcag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tttttgcctgagacccaaattaccaggaaggaccgactcctggagaagagtcacaggcag 444

                                                                       
Query: 241 aggaaaggggccccttgcatctctctgcagggtgcctgcgacacgagggcccctatgcta 300
           ||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 445 aggaatggggccccttgcatctctctgcagggtgcctgcgacacgaggacccctatgcta 504

                                                                       
Query: 301 tgtccgctcactcacgtgctcgatcctcatccaacaatcacatattcatcatcactgggc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgtccgctcactcacgtgctcgatcctcatccaacaatcacatattcatcatcactgggc 564

                                                                       
Query: 361 acttgggatgtgacaggggagagaggggctgcttcagtctcatgggaggggctgtcagtc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 acttgggatgtgacaggggagagaggggctgcttcagtctcatgggaggggctgtcagtc 624


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 824
Length adjustment: 9
Effective length of query: 411
Effective length of database: 815
Effective search space:   334965
Effective search space used:   334965
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)