Query= MSMg01no376_g03.b1 MSMg01no376_g03.b1 CHROMAT_FILE:
MSMg01no376_g03.b1 PHD_FILE: MSMg01no376_g03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:16 2005
(547 letters)
>mm_chr5_47006558_47007503
Length = 946
Score = 1027 bits (531), Expect = 0.0
Identities = 541/545 (99%), Gaps = 3/545 (0%)
Strand = Plus / Minus
Query: 4 ggaattctgcatcttgaattgtaaatatatgtaaatattttactgtatgttaactcagtg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 654 ggaattctgcatcttgaattgtaaatatatgtaaatattttactgtatgttaactcagtg 595
Query: 64 ttaacacacagtatcacaccttcctgtatgaatgaagatgtgaaacccatccttccttca 123
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 ttaacacacagtagcacaccttcctgtatgaatgaagatgtgaaacccatccttccttca 535
Query: 124 agcagttagatcttcctcctaattgagcaggaagcagtctacagtactgtaagggagcta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 agcagttagatcttcctcctaattgagcaggaagcagtctacagtactgtaagggagcta 475
Query: 184 ggagccagttttcttcatgcccttcaaggaaaagctaacatgtgagtagaaagcatctgc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ggagccagttttcttcatgcccttcaaggaaaagctaacatgtgagtagaaagcatctgc 415
Query: 244 tctgtatacctgtgaaattcaccttgtcaaaaattgcctcttttttttttttcaaaagaa 303
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 414 tctgtatacctgtgaaattcaccttgtcaaaaattgcctc--ttttttttttcaaaagaa 357
Query: 304 ctggcattgtttactac-aaaaaagggtcttgcttaagatgtttccacaggtgggatcct 362
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ctggcattgtttactacaaaaaaagggtcttgcttaagatgtttccacaggtgggatcct 297
Query: 363 gtatattcagtctaaagaatggcttccaccatatatttacaatgcacaaagatccctgac 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gtatattcagtctaaagaatggcttccaccatatatttacaatgcacaaagatccctgac 237
Query: 423 atgtaacaatcagacattgtctttattctaaaccagtggttcccaacctttctaatgcta 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 atgtaacaatcagacattgtctttattctaaaccagtggttcccaacctttctaatgcta 177
Query: 483 tgaccctttaatacagttcctcatgttgtggttaccccctccccaaccacaaaattattt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 tgaccctttaatacagttcctcatgttgtggttaccccctccccaaccacaaaattattt 117
Query: 543 ttgtt 547
|||||
Sbjct: 116 ttgtt 112
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 946
Length adjustment: 10
Effective length of query: 537
Effective length of database: 936
Effective search space: 502632
Effective search space used: 502632
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_g03.g1 MSMg01no376_g03.g1 CHROMAT_FILE:
MSMg01no376_g03.g1 PHD_FILE: MSMg01no376_g03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:16 2005
(553 letters)
>mm_chr5_46868137_46869089
Length = 953
Score = 1038 bits (537), Expect = 0.0
Identities = 549/553 (99%)
Strand = Plus / Plus
Query: 1 actttgatgacaactgaatgtggcaggtgcttcgggaagcacacatcacacttcatccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actttgatgacaactgaatgtggcaggtgcttcgggaagcacacatcacacttcatccaa 260
Query: 61 ggggaatttaactttaaaattctctcacatgtgtaatgtgtctacccataatgttttagc 120
|| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 ggagaatttaactttaaaattctctcacatgtgtaatgtgtctacccttaatgttttagc 320
Query: 121 tgaaatgtctaggtctgtttcatttttcatggctttccacctgaatcatgatctgctaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgaaatgtctaggtctgtttcatttttcatggctttccacctgaatcatgatctgctaac 380
Query: 181 ttatcatgggtctcattgctgggcttggagtgaagaatactttaggttgaactcactgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttatcatgggtctcattgctgggcttggagtgaagaatactttaggttgaactcactgga 440
Query: 241 aactacacatttgaccttgcagatgttgaaaagtaaatttgtctaaactcacattttgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aactacacatttgaccttgcagatgttgaaaagtaaatttgtctaaactcacattttgtg 500
Query: 301 tcagtaagatgagttgctggcagtggagaagtagttgagtgagaggttccctctatggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcagtaagatgagttgctggcagtggagaagtagttgagtgagaggttccctctatggtt 560
Query: 361 ttagagaaatactgcagatgtcttctgggtttgtgatttacacatagatgaaccctctat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttagagaaatactgcagatgtcttctgggtttgtgatttacacatagatgaaccctctat 620
Query: 421 ctatatgtataaatcatatagatgcagtatcagtttttgaaatgaagacagacatcttta 480
||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 621 ctatatgtataaatcatatagatgcagtatcagtttttgaactaaagacagacatcttta 680
Query: 481 ttctagcttcccaagatacttctaggccaacatgtaaatatgagctcagcatcttcacaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttctagcttcccaagatacttctaggccaacatgtaaatatgagctcagcatcttcacaa 740
Query: 541 cattttgatttct 553
|||||||||||||
Sbjct: 741 cattttgatttct 753
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space: 512049
Effective search space used: 512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
