TTTGTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCTGATTTTCCCAGACTTTTATCATGAAGGGGTGTTGGATTT
TGTCAAATGCTTTCTCAGCATCTAATGAGATGATCATGTGGTTTTTGTCT
TTGAGTTTGTTTATATAGTGGATTATGTTGATGGATTCCCGTATATTAAA
CCATCCCTGCATCCCTGGGATGAAGCCTACTTGGTCAGGATGGATGATCC
TTTTATGTGTTCTTGGATTCGCTTTGCGAGGATTTTATCGAATATTCTTT
GCATCTATATCCATTTTTTTTTTTTGTTCTGAACTTCTCTTTCTTCGTTG
CTGCATTTTTGCTTTTTTTCCCTCCCTCACCTCCTTCCTCCCTCTTCTTC
TTTCCCCCTCCTCCCCTCCCCCCCTTCTTTCCCCCTTCTCTCCCACTCCC
CTTCTTTTTTCCCCCTTATTCCCACCCCCTCTTCCTTCCCCTTCCTTATT
CCTTCCCCCCCCCTTTTTTCCTCTCCCTCTTTTCTTTTTTCCTTTTTCCC
ACCTTTCTTCCCCCTTTCTTTCTTTTCCCCCCTCCCTTCTCTTTTCCTCC
CCTTCTCCTTTCTCTTCTCTCCCTCCTCTCTCCCCCTTCTTCCCCCCTTC
CACCCCCTTTTCCTTTTTTTTCTCCTTTTTCCTTCTCTTCTTTTTCCTCC
CCCCTTCTTTCCATCCCTTTTCCTCTCCCTTTTCCCCTTTCATTCTTTCT
TTTCTCCCCCTTTTCTTTTTTTCCCTCTCTTTTTCCCCCCCCCCTTTTCC
CTCCCCTTTATCTTTCCCCCCTCTTTTCCCTCCCCTCCCCCTCCC

TCCCAATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTCCTCTGTTGGCCAGAAGCTACAT
TTCAGCTTTGACAAAAGGCCTGGTCATCTTCAACTTGTCAACTGCTTTGT
ACTATGAGCAATGTGTAACACCTGGACATACCATGAAGCAGGATGTAGTG
TCAGGCAAAGCTGTCATTAGTGAAGCCAACTCAGCCTTCAAAGTTGTTTC
ACGTTGGCAAATCATACCCCCAAGCAGTATTTCTGTGTTTTGGCAAAGTA
ATAACCTTGAATTCTATTAGTCACTAGAAAAAACCAAGCCCATGGAGGAA
CTGACAGTTAAATATTAGCCTGCTTACTCTTTAAACTGCCTGTGATTGAA
AATTAAACTGGAAACATATTTGAGACCTCAAATTTCTAGAGAACCCTGAC
AATTCAGATAAAGTAACCTAATTACCTTCTAGTTATAATTTTTTAAATTT
TGCTTACTTTGCTTTCTTATTTGCTTCCGCAAGATGTAAGTTAAAAAAAT
GTTACATTTGTTTTACAATTTCTGAAGAGAATAACCCTTTTCCCTTGAAA
TTTCAAAAAAAAGGCGGCCGAATATGTTTATTACCCCCCGGACATTTTTT
TGTACACAAATTAACCCCTCCCCATAATTATTCCCGAATTTCTTCCCCTC
TTTTTCGCTCCGCTTCTCACCAACCCCCCACTTAAACCCTTACTTCACAA
TTCTCTTCCCCTTTATTT

Query= MSMg01no377_e10.g1 MSMg01no377_e10.g1 CHROMAT_FILE:
MSMg01no377_e10.g1 PHD_FILE: MSMg01no377_e10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:24 2005
         (442 letters)



>mm_chr5_12664641_12665483
          Length = 843

 Score =  804 bits (416), Expect = 0.0
 Identities = 434/440 (98%), Gaps = 1/440 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ctctgttggccagaagctaca-tttcagctttgacaaaaggcctggtcatcttcaacttg 62
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 643 ctctgttggccagaagctacattttcagctttgacaaaaggcctggtcatcttcaacttg 584

                                                                       
Query: 63  tcaactgctttgtactatgagcaatgtgtaacacctggacataccatgaagcaggatgta 122
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 583 tcaactgctttgtactatgagcaatgtgtaacacctggacatacgatgaagcaggatgta 524

                                                                       
Query: 123 gtgtcaggcaaagctgtcattagtgaagccaactcagccttcaaagttgtttcacgttgg 182
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 523 gtgtcaggcaaagctgtcattagtgaagccaactcagctttcaaagttgtttcacgttgg 464

                                                                       
Query: 183 caaatcatacccccaagcagtatttctgtgttttggcaaagtaataaccttgaattctat 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 caaatcatacccccaagcagtatttctgtgttttggcaaagtaataaccttgaattctat 404

                                                                       
Query: 243 tagtcactagaaaaaaccaagcccatggaggaactgacagttaaatattagcctgcttac 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 tagtcactagaaaaaaccaagcccatggaggaactgacagttaaatattagcctgcttac 344

                                                                       
Query: 303 tctttaaactgcctgtgattgaaaattaaactggaaacatatttgagacctcaaatttct 362
            ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 343 gctttaaaatgcctgtgattgaaaattaaactgtaaacatatttgagacctcaaatttct 284

                                                                       
Query: 363 agagaaccctgacaattcagataaagtaacctaattaccttctagttataattttttaaa 422
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 agagaaccctgacaattcagataaagtaacctaattaccttctagttataattttttaaa 224

                               
Query: 423 ttttgcttactttgctttct 442
           ||||||||||||||||||||
Sbjct: 223 ttttgcttactttgctttct 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 843
Length adjustment: 9
Effective length of query: 433
Effective length of database: 834
Effective search space:   361122
Effective search space used:   361122
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)