Query= MSMg01no378_n14.b1 MSMg01no378_n14.b1 CHROMAT_FILE:
MSMg01no378_n14.b1 PHD_FILE: MSMg01no378_n14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:26 2005
(148 letters)
>mm_chr5_118802840_118803388
Length = 549
Score = 246 bits (127), Expect = 6e-70
Identities = 133/135 (98%), Gaps = 1/135 (0%)
Strand = Plus / Plus
Query: 12 gaattcatgatctac-aaagaggatgaccatggaattcaaagagtctcatgggcttgggg 70
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 gaattcatgatctaccaaagaggatgaccatggaattcaaagagtctcatgggcttgggg 271
Query: 71 catgggagtgggacacatggctcagttcttaaaggatacactgttaagtttcaaacccgg 130
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 catgggagtgggacacatggctcagttcttaaaggatacactgttaagtttcaaacccgg 331
Query: 131 aatgggggtgggggg 145
|||||||| ||||||
Sbjct: 332 aatgggggcgggggg 346
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 148
Length of database: 549
Length adjustment: 8
Effective length of query: 140
Effective length of database: 541
Effective search space: 75740
Effective search space used: 75740
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no378_n14.g1 MSMg01no378_n14.g1 CHROMAT_FILE:
MSMg01no378_n14.g1 PHD_FILE: MSMg01no378_n14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:19:26 2005
(405 letters)
>mm_chr5_118975152_118975956
Length = 805
Score = 750 bits (388), Expect = 0.0
Identities = 397/400 (99%)
Strand = Plus / Minus
Query: 1 agtattaaagctaggctgggctccatgagagcttttcacaaatgaaagaactcactaggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 agtattaaagctaggctgggctccatgagagcttttcacaaatgaaagaactcactaggt 341
Query: 61 gccagtttcaatgggttccagattctccatataagagaggatcacacccagataaatcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 gccagtttcaatgggttccagattctccatataagagaggatcacacccagataaatcca 281
Query: 121 tgggaaattgacagcatctgtaagtggaaaacacatgcaataccaataacctacccataa 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 280 tgggaaattgacagcatctgtaagtggaaaacacatgcaataccaacaacctacccataa 221
Query: 181 cttgaccaatctgactaaaatgtttgtttgtttgtttgttgcaactagatctctctatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 cttgaccaatctgactaaaatgtttgtttgtttgtttgttgcaactagatctctctatac 161
Query: 241 agccctatttggcctggaacttgctatggagatcatactatccgtgaactcgtagagctc 300
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 agccctaggtggcctggaacttgctatggagatcatactatccgtgaactcgtagagctc 101
Query: 301 cacctgcctttgcctcccaagtgctggaattaaaggctcaaaccaccaagcccgccttaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 cacctgcctttgcctcccaagtgctggaattaaaggctcaaaccaccaagcccgccttaa 41
Query: 361 agatttgttttatttttagttacctgtatgtatgtatgtg 400
||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 agatttgttttatttttagttacctgtatgtatgtatgtg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 805
Length adjustment: 9
Effective length of query: 396
Effective length of database: 796
Effective search space: 315216
Effective search space used: 315216
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
