XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
ATTCCCATCACAGAAATTTTCATTTGTTAGCTTCAGATGTCTAGTGTGAG
TGTTGTTGTTCTCTTATAGGATAATTCAACTTGAACTCATTTTATATCAG
TCATGGTGCAATGAATTCATGACAATAGACCTGTTTATCATTGTCCCAAA
AATTGACTCAGAGTTTTTAATTTTCTCATATTCTTGCTATTACTTTTTTG
TTCTTTTCTCTATGTTTTCTCTAACATCAATGGCAATACTATATACAGTT
TTGAATTATATGCCATAATGAACAATTATTATTTCAGTATTTATAAAACA
AAAGAGTTATATATGCTCCCTATAACTAAATCTCATTCATTAAAATTTAG
TTTCAAAGACACTCAAAGTACAGGTCTGCATATGTAGCAGAAGATGGCCT
TGTCTGGCATCAATGAGAGGGGAGGTCCTAGTTTCTCACAGCCTAGAGGA
ATGCTAGGGTGGTGAGATGGGAGAGGGTGTGTANCTGGNGAAGCATCTTC
ATAGAAACAGGGGTCATGGGGTGGAATAAAGGGTTTTCAGAGAAAAATAT
GAAATAAAATGACATTTGATATATTAATAAAAGAATATAACCCCCAATAT
TTTTTTTAACAAAACCTTTTTATACTGGGGGTTTAAAAAAAAACCAAATT
TTTAAGGTTTTTTATTATTTCCAATTCCTAAACCTTACCCAAATTTCTCA
TTTAGTTTTATATTGAGAAAAAG

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXAGGGCCCATACTTAAACATGATAAAAGCAA
TCTACAACAAACCAGTAGTCAACATCAAAGTAAATGGTGAGAAGCTGGAA
GCAATCCCACTAAAATCAGGGACTAGTCAAGGCTGCCCACTTTCTACCTA
CCTATTCAACATTGAACTTGAAGTCCTAGCCAGAGCAATTCGACAACAAA
AGGAGATCAAGGGGATACAAATTGGAAAGGAAGAAGTCAAAATATCACTT
TTTGCAGATGATATGATAGTATATATAAGTGACCCTAAAAATTCTACCAG
AGAATGCCTACAGCTGATAAACAGCTTCAAAGAAATAACTGGATATAAAA
TTAACACAAACAATTATTCTGTACACAAAGAATAAACAGGCTGAGAAAGA
AATTAGGGAAACAACACCATTCTCAATAGTCACAAATAATGTAAAGTAAT
GTCTATAAAATATCTGTATGATAAGAACTTCAAGTCTCTGAAGAAAGAAA
TTAAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCATGGATTGGCAGG
ATCAATATAGTAAAAATGGTTATCTTGCCAAAAGCAATCTACAGATTCAA
TGCAATCCCCATCAAAATTACAACTCAATTCTTCTACGAATTATAAAGGA
CAATCAGCAAAATCATGTGGGAATACAAAAACCCTAGGATAGCAAAAACT
CTTCTCAG

Query= MSMg01no379_n15.b1 MSMg01no379_n15.b1 CHROMAT_FILE:
MSMg01no379_n15.b1 PHD_FILE: MSMg01no379_n15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:20:43 2005
         (477 letters)



>mm_chr5_61428044_61428920
          Length = 877

 Score =  901 bits (466), Expect = 0.0
 Identities = 472/474 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcattcccatcacagaaattttcatttgttagcttcagatgtctagtgtgagtgt 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 ggaattcattcccatcacagaaattttcatttgttagcttcagatgtctagtgtgagtgt 526

                                                                       
Query: 64  tgttgttctcttataggataattcaacttgaactcattttatatcagtcatggtgcaatg 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 tgttgttctcttataggataattcaacttgaactcattttatatcagtcatggtgcaatg 466

                                                                       
Query: 124 aattcatgacaatagacctgtttatcattgtcccaaaaattgactcagagtttttaattt 183
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 465 aattcatgacaatagacctgtttatcattatcccaaaaattgactcagagtttttaattt 406

                                                                       
Query: 184 tctcatattcttgctattacttttttgttcttttctctatgttttctctaacatcaatgg 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tctcatattcttgctattacttttttgttcttttctctatgttttctctaacatcaatgg 346

                                                                       
Query: 244 caatactatatacagttttgaattatatgccataatgaacaattattatttcagtattta 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 caatactatatacagttttgaattatatgccataatgaacaattattatttcagtattta 286

                                                                       
Query: 304 taaaacaaaagagttatatatgctccctataactaaatctcattcattaaaatttagttt 363
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 285 taaaacaaaagagttatatatgctctctataactaaatctcattcattaaaatttagttt 226

                                                                       
Query: 364 caaagacactcaaagtacaggtctgcatatgtagcagaagatggccttgtctggcatcaa 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 caaagacactcaaagtacaggtctgcatatgtagcagaagatggccttgtctggcatcaa 166

                                                                 
Query: 424 tgagaggggaggtcctagtttctcacagcctagaggaatgctagggtggtgaga 477
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 tgagaggggaggtcctagtttctcacagcctagaggaatgctagggtggtgaga 112


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space:   404889
Effective search space used:   404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)