GCGCTATACGACTCACTATATTCAGAGGATCCGCGGAATTCTAAGTGACT
GCACAAAGGCATTCACCAGGAAGGAGCTCATGGAGAAGGATCCGGGAGGG
ATTTTTCTGTTTCAAGAGCAAGGTCTGTTTGAGCTCACTATAGCAAACTA
TCTGCTAGACGGTCACACTTATTTAGACAGGTAAGCAAATGTGAAATATG
GAAGACATGTTAGGCTAAAGATACAACTGCATATTCACAAGCATAAAGGT
ATGATTTAAATTTTTTGAAATCACAGTCTGGTCATGCAGATAGCAGATGT
TTTGCAATCCAGAGGGAAAGTGAGATTTCCAAAAAAATACAGGAGTAATA
CTGATAAATTTATAAAAGATTAATGGTAAATTGAAGAAATCAAAAGCTAA
ATTTGATTTATTTTCAACTTAAAAGGCCTTCATAATATCTAGAGAACTAG
TTGGTTCAAGTGGTAAATTTCAAAAGGTTGGATGGATTTCTGGAGAGAAT
GACAAAAGAAGTAATTAAGTTACTAAGAATTTTCACAAGGATGTATTGCT
GTACGAGGGAAAGAATAACAGGGCATAATGTTATGGAGATTAAGGAGCAA
AGGGAGATCTTATTTTTCTTTTCTAAGCCAAAATAATAACTGTGTTGCTG
GATGTCAATCTATAATCCAGTGGATCAAGAAGACACAATACTGCCAGCCA
GAAAAGAAAGATTTACTGCAATTCTCAAGTAGGTCAAAATGGACTATAAA
AN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXTGAGCAAAATGTAGGCTTTGATTTTTCAAAACCTACTTTT
AATAAGGGTTCTTAAATGCTTTAACATCCCTTCTAGCTAGCCCACCACTC
ACCAGAAATAGTAGAAAGTGGAAGTTAAAAGAGCTAAGGAGGATGTGGAC
CTGTTTAGAGATAGTTCTGTGGAGCCAATCCAATTTGTGTTGTCAGGACA
TCAGCAGTTCAGTTCTCATGAATCAACAATGGTAGCCAATCAGCAATGGC
AGGTTGATTTAGAGGAAACTGCAAGGCTCTGCCAATTGGCTGAGGAAGTG
GCGAGAAGCCATTGGAACACCAGCAGAAGTTCTTTGGTGGCATTTCTCTC
TATGAAATCATGAAAAATGAAGACCAGCAACAAATGGCAAGGCAAATCAA
TACCACACAGCATCATCAGTGAAGCCCAGCATCAGCAAAGCTCAATGATG
ATCAGCAAAGAGTAGCAAGGAAAACCAATACCACACAGCATAGTCCACTC
TCTGGTGGGNTATATTTATATTCTTTCTAAACATCATGTGTTGTCTNCAG
CTTATACTCTAGCAAAGCATCACATGACCTTTTTCCTAAGCAGCTTCCAA
AAAGCATCCTCCCACATATCTGCTTCAGCAAAAACATCCTCTTCTAAGAC
AGTTTCTTTGAAAAACACCCATGACACAACTGAATTCTCCGAAATGGTCC
CTCCCAAGAAATG

Query= MSMg01no382_b17.b1 MSMg01no382_b17.b1 CHROMAT_FILE:
MSMg01no382_b17.b1 PHD_FILE: MSMg01no382_b17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:44 2005
         (621 letters)



>mm_chr5_6348232_6349252
          Length = 1021

 Score = 1133 bits (586), Expect = 0.0
 Identities = 604/610 (99%)
 Strand = Plus / Minus

                                                                       
Query: 12  gaattctaagtgactgcacaaaggcattcaccaggaaggagctcatggagaaggatccgg 71
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 gaattctaagtgactgcacaaaggcattcaccaggaaggagctcatggagaaggatccgg 762

                                                                       
Query: 72  gagggatttttctgtttcaagagcaaggtctgtttgagctcactatagcaaactatctgc 131
           |||||||| |||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 761 gagggattcttctgtttcaagagcaaggtctgtttgagctcgctatagaaaactatctgc 702

                                                                       
Query: 132 tagacggtcacacttatttagacaggtaagcaaatgtgaaatatggaagacatgttaggc 191
           |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 701 tagacggtcacacttatttagacaggtaagcaaacgtgaaatatggaagagatgttaggc 642

                                                                       
Query: 192 taaagatacaactgcatattcacaagcataaaggtatgatttaaattttttgaaatcaca 251
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 taaagatacaactgcatattcacaagcataaaggtatgatttaaattttttgaaatcaca 582

                                                                       
Query: 252 gtctggtcatgcagatagcagatgttttgcaatccagagggaaagtgagatttccaaaaa 311
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 581 gtctggtcatgcagatagcagatgttttgcaatccagagggaaagtgagatttcaaaaaa 522

                                                                       
Query: 312 aatacaggagtaatactgataaatttataaaagattaatggtaaattgaagaaatcaaaa 371
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 aatacaggagtaatactgataaatttataaaagattaatggtaaattgaagaaatcaaaa 462

                                                                       
Query: 372 gctaaatttgatttattttcaacttaaaaggccttcataatatctagagaactagttggt 431
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 gctaaatttgatttattttcaacttaaaaggccttcataatatctagagaactagttggt 402

                                                                       
Query: 432 tcaagtggtaaatttcaaaaggttggatggatttctggagagaatgacaaaagaagtaat 491
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 tcaagtggtaaatttcaaaaggttggatggatttctggagagaatgacaaaagaagtaat 342

                                                                       
Query: 492 taagttactaagaattttcacaaggatgtattgctgtacgagggaaagaataacagggca 551
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 taagttactaagaattttcacaaggatgtattgctgtacgagggaaagaataacagggca 282

                                                                       
Query: 552 taatgttatggagattaaggagcaaagggagatcttatttttcttttctaagccaaaata 611
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 taatgttatggagattaaggagcaaagggagatcttatttttcttttctaagccaaaata 222

                     
Query: 612 ataactgtgt 621
           ||||||||||
Sbjct: 221 ataactgtgt 212


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space:   617721
Effective search space used:   617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)