Query= MSMg01no382_b18.b1 MSMg01no382_b18.b1 CHROMAT_FILE:
MSMg01no382_b18.b1 PHD_FILE: MSMg01no382_b18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:44 2005
(354 letters)
>mm_chr5_9455437_9456189
Length = 753
Score = 553 bits (286), Expect = e-162
Identities = 331/348 (95%), Gaps = 5/348 (1%)
Strand = Plus / Minus
Query: 9 gaattctcttttca--tttactggcaaacgtcacttcagagtaaaggtccacccattgtg 66
|||||||||||||| | || ||||||||||||||||||||||||||||||||||||
Sbjct: 553 gaattctcttttcagc---aatgacaaacgtcacttcagagtaaaggtccacccattgtg 497
Query: 67 tctatgacctgtctttgtatgttctatatggtattatttttctcaaatagattccaatgc 126
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 496 tctatgacctgtctttgtatgttctatatggtattatttttcccaaatagattccaatgc 437
Query: 127 ctaaggctctaatatggccagcatgtttatacttaactttatgcctgcatattcttgccc 186
||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |
Sbjct: 436 ctaaggctctaatatggccagcatgtttacacttaactttatacctgcatattcttgctc 377
Query: 187 taacccaaaggcttggactacctttctgccacaatatgagtatgtatgcttcactgcgtt 246
|||||||||||||||||||||||| |||||||||| |||||||||||||||||||| |||
Sbjct: 376 taacccaaaggcttggactaccttcctgccacaatttgagtatgtatgcttcactgagtt 317
Query: 247 tgagttcagaaagctttctctggactatgtgtgtggttctttggttctttgaggaacctg 306
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||
Sbjct: 316 tgagttcagaaagctttctctggactatgtgtgtggttctatggtcctttgaggaacctg 257
Query: 307 cacttagtgtggaatggggtgtggctttggagtgtggagatagtagtg 354
|||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 256 cacttagtgtgggatggggtgtggctttggagtgtggagatagtagtg 209
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 354
Length of database: 753
Length adjustment: 9
Effective length of query: 345
Effective length of database: 744
Effective search space: 256680
Effective search space used: 256680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_b18.g1 MSMg01no382_b18.g1 CHROMAT_FILE:
MSMg01no382_b18.g1 PHD_FILE: MSMg01no382_b18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:45 2005
(291 letters)
>mm_chr5_9301433_9302123
Length = 691
Score = 536 bits (277), Expect = e-157
Identities = 288/293 (98%), Gaps = 4/293 (1%)
Strand = Plus / Plus
Query: 1 tgccttggtacttgaatgaatgggagctttccttttcattgtgagaataatgggcagagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgccttggtacttgaatgaatgggagctttccttttcattgtgagaataatgggcagagg 260
Query: 61 atctggcttgagagtttcaagggtaaacacaccagtagttgataaaatgcaaaatgacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atctggcttgagagtttcaagggtaaacacaccagtagttgataaaatgcaaaatgacct 320
Query: 121 taagaatctggtttgtgacagttttctttttctttctttgtatatacatatcttttattg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taagaatctggtttgtgacagttttctttttctttctttgtatatacatatcttttattg 380
Query: 181 aaaatcattattaccttaacaaaatgctattcattttgtgtatatacatccatatatata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaatcattattaccttaacaaaatgctattcattttgtgtatatacatccatatatata 440
Query: 241 tatatat--ggatgtgtatatat--atatatatatatatatttatatatatac 289
||||||| |||||| ||||||| ||||||||||||||||||||||||||||
Sbjct: 441 tatatatatggatgtatatatatgtatatatatatatatatttatatatatac 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 78
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
