Query= MSMg01no382_b23.b1 MSMg01no382_b23.b1 CHROMAT_FILE:
MSMg01no382_b23.b1 PHD_FILE: MSMg01no382_b23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:45 2005
(442 letters)
>mm_chr5_125442862_125443703
Length = 842
Score = 832 bits (430), Expect = 0.0
Identities = 436/438 (99%)
Strand = Plus / Minus
Query: 5 gaattcgtaagtaaatgtcccagatgtcccacgggttgggtgactgaacagggagggtac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 gaattcgtaagtaaatgtcccagatgtcccacgggttgggtgactgaacagggagggtac 471
Query: 65 aaagctgaatggagaggggagtgccctctgagggagctcagcctggctgctgtcacactg 124
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 aaagctgaatggagaggggcgtgccctctgagggagctcagcctggctgctgtcacactg 411
Query: 125 gccccgagcagtgcaaggagagaactgtgggtctcttgcagtcctggttggttaggccag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gccccgagcagtgcaaggagagaactgtgggtctcttgcagtcctggttggttaggccag 351
Query: 185 ggcaagtgtgggctccagagttgtgggccagggcagatcacaaaggactgccacgtgagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ggcaagtgtgggctccagagttgtgggccagggcagatcacaaaggactgccacgtgagg 291
Query: 245 actagggtcatatctcatggtttacactaactggggaaactgggttcctaaggagaggtg 304
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 actagggttatatctcatggtttacactaactggggaaactgggttcctaaggagaggtg 231
Query: 305 ccatgtccgtccttcctccgatcttcttcaggaggtagaatcacagagaagtgggacctt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 ccatgtccgtccttcctccgatcttcttcaggaggtagaatcacagagaagtgggacctt 171
Query: 365 gctggagggagcaggtccctgggggaaggtccttgaggactatatgttgtcctgtccctc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 gctggagggagcaggtccctgggggaaggtccttgaggactatatgttgtcctgtccctc 111
Query: 425 ctgcctgcctctctgctt 442
||||||||||||||||||
Sbjct: 110 ctgcctgcctctctgctt 93
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no382_b23.g1 MSMg01no382_b23.g1 CHROMAT_FILE:
MSMg01no382_b23.g1 PHD_FILE: MSMg01no382_b23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:23:46 2005
(457 letters)
>mm_chr5_125291429_125292285
Length = 857
Score = 868 bits (449), Expect = 0.0
Identities = 455/457 (99%), Gaps = 1/457 (0%)
Strand = Plus / Plus
Query: 1 ttgagtttgtgggtcagtatttcactttctggggacttgttctttttttttgtttgtttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ttgagtttgtgggtcagtatttcactttctggggacttgttctttttttttgtttgtttg 261
Query: 61 ttttctgcaatgctggggacccgatgccagagcctcatatgctaggctggtgcttgccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ttttctgcaatgctggggacccgatgccagagcctcatatgctaggctggtgcttgccac 321
Query: 121 tgagctgccccccccagtcctccttttccctgtttctaaccccccactttctctgtgcct 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tgagctgccccccc-agtcctccttttccctgtttctaaccccccactttctctgtgcct 380
Query: 181 tccattgcaggcgataactccatgattcccgatgagaaacttgaggagcttgtggagcac 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccactgcaggcgataactccatgattcccgatgagaaacttgaggagcttgtggagcac 440
Query: 241 gtggtcatggtccaccagtcggtgggcgagttcagcaagcagttccagcagaagctgagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtggtcatggtccaccagtcggtgggcgagttcagcaagcagttccagcagaagctgagg 500
Query: 301 cggagcaactatgtgacgcccaagaactacctagacttcattaatacctactcaaaacta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cggagcaactatgtgacgcccaagaactacctagacttcattaatacctactcaaaacta 560
Query: 361 ctagatgagaaaacccagtacaacataggtgagcgggcagaggagtgggcaggatagatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctagatgagaaaacccagtacaacataggtgagcgggcagaggagtgggcaggatagatc 620
Query: 421 ggatgaggaggcagggcatcgttatggcatcggctca 457
|||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggatgaggaggcagggcatcgttatggcatcggctca 657
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 857
Length adjustment: 10
Effective length of query: 447
Effective length of database: 847
Effective search space: 378609
Effective search space used: 378609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
