XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTGTGTCCT
GTCTACCTTACCTATAAAGCCAGGAGGTGGGCCAGGTGTGGGGGCAAATG
CTTAAGCACTCAGGAGGCAGAAGCAGAAGCAGGCGGATTTCTGTGAGTCC
GACACCAACCTAGTCTTTATAGTGAGCTCCAGGACAACTGGGGATACATA
GAGAGACTCTGTCTCAAGCAACCAACCAAGCAAAGAAAACCAGGGAATGG
GGCTAATTGTGTGATTTATGATAAATAGCTATTAATCTTGTCCACATGAA
GCCATGCTCCTGCCTCGGCTTTAAGCACAGGAGAGTAAGAATCCTGATTC
CTAAGCTGCTGAATGAGGTAGACAAAGTCCCACCACCGTGTGCTAAGAGA
TGTAAAGTAACAGTTTGTTAGTTCAAGAGTCCCTAGCTTATCGAAGCTTC
CTTGACCATTCATTCAGACTGAAAGGCTCCTTTGAATATCTTGACACCAA
TCCCTCTCTGTTCAAAGGTCCCCTACAAACTTCCCAGTCATTATTTCATT
TTACAAGCCACATGTCAGGGAAGTGGGGCCTCTTGGTGACCCTAAAGATG
GTGACTGGAAGCAGCCTTTAACATCTCTGGCTGTGAATCCATCTTTCTTC
TACTCGCTTTCCCCACCTCAGATTCCCCAGAGTCCTCTCAGTCATCTGGG
CTCTCTAGGAACTTCTCTACAGGGGAATGTGGCCTGTGTTGTCTG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXTGCACTAAACCCATCTGGTCCTGGGCTATTTTTGGTTGGGAGA
CTTTTAATGACTGTTTTTATTTCTTTAGGGGTTATGGAACTGTTTAGATG
GTTTATCGGATCCTGTTTAACTTTTGTATTTAGAATCCGTCTAGAAAATT
GTCCATTTCATTCAGATTTTCCAGTTTTGTTCAGTATAGGCTTTTGTAGT
AGGCTTTGATGATTTTTTTAAATTTCCTCAGTTTCTGTTGTTATATCTCC
CTTTTCATTTCTGATTTTGTTAATTTGGTTACAGTCTCTGTGCCCTCTAG
TTTATCTGGCTAAAGGTTTATCTAACTTGTTGATTATTTTCTCAAAGAAC
CAGCTTCTGGTTTGGTTGATTCTTTATATAGTTCTTTTTGTTTCTACTTT
GTTGGTTTCAGCCCTGAGTTTGATTATTTCCTGCCATCTACTCCTCTTGG
TGTATTTGATGCTTTTTGCTCTAGAGCTTTCAGGTTTGCTGTTAAGCTGC
TACTGGTTGCTCTCTCCAGCTTCTTTTTTGGAGACACTCAGAGCTGAGTT
TTCTTCTTTACCGATGCTTTCCTTATATCCCCCAAAGATAAGGGAGCGTG
GGGCCTCCTTTTTCTTGGAATTCTCAAAAGCAAATTCCTTCTTTATTTTT
CTCTTTGGCCAAATTATCACTGAGTATGTTCTTGTCCCTCCTCTCCTTGT
TATTGATACCTCTT

Query= MSMg01no382_g15.b1 MSMg01no382_g15.b1 CHROMAT_FILE:
MSMg01no382_g15.b1 PHD_FILE: MSMg01no382_g15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:09 2005
         (576 letters)



>mm_chr5_39196618_39197593
          Length = 976

 Score = 1083 bits (560), Expect = 0.0
 Identities = 569/572 (99%), Gaps = 1/572 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctgtgtcctgtctaccttacctataaagccaggaggtgggccaggtgtgggggca 64
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattctgtgtcctgt-taccttacctataaagccaggaggtgggccaggtgtgggggca 264

                                                                       
Query: 65  aatgcttaagcactcaggaggcagaagcagaagcaggcggatttctgtgagtccgacacc 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatgcttaagcactcaggaggcagaagcagaagcaggcggatttctgtgagtccgacacc 324

                                                                       
Query: 125 aacctagtctttatagtgagctccaggacaactggggatacatagagagactctgtctca 184
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aacctagtctatatagtgagctccaggacaactggggatacatagagagactctgtctca 384

                                                                       
Query: 185 agcaaccaaccaagcaaagaaaaccagggaatggggctaattgtgtgatttatgataaat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agcaaccaaccaagcaaagaaaaccagggaatggggctaattgtgtgatttatgataaat 444

                                                                       
Query: 245 agctattaatcttgtccacatgaagccatgctcctgcctcggctttaagcacaggagagt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agctattaatcttgtccacatgaagccatgctcctgcctcggctttaagcacaggagagt 504

                                                                       
Query: 305 aagaatcctgattcctaagctgctgaatgaggtagacaaagtcccaccaccgtgtgctaa 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aagaatcctgattcctaagctgctgaatgaggtagacaaagtcccaccaccgtgtgctaa 564

                                                                       
Query: 365 gagatgtaaagtaacagtttgttagttcaagagtccctagcttatcgaagcttccttgac 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gagatgtaaagtaacagtttgttagttcaagagtccctagcttatcgaagcttccttgac 624

                                                                       
Query: 425 cattcattcagactgaaaggctcctttgaatatcttgacaccaatccctctctgttcaaa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cattcattcagactgaaaggctcctttgaatatcttgacaccaatccctctctgttcaaa 684

                                                                       
Query: 485 ggtcccctacaaacttcccagtcattatttcattttacaagccacatgtcagggaagtgg 544
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gctcccctacaaacttcccagtcattatttcattttacaagccacatgtcagggaagtgg 744

                                           
Query: 545 ggcctcttggtgaccctaaagatggtgactgg 576
           ||||||||||||||||||||||||||||||||
Sbjct: 745 ggcctcttggtgaccctaaagatggtgactgg 776


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 976
Length adjustment: 10
Effective length of query: 566
Effective length of database: 966
Effective search space:   546756
Effective search space used:   546756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)