Query= MSMg01no383_a23.b1 MSMg01no383_a23.b1 CHROMAT_FILE:
MSMg01no383_a23.b1 PHD_FILE: MSMg01no383_a23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:59 2005
(459 letters)
>mm_chr5_59213905_59214763
Length = 859
Score = 864 bits (447), Expect = 0.0
Identities = 453/455 (99%)
Strand = Plus / Minus
Query: 5 gaattcattagactgtgttaatcacagttgtagaacatataaatttaaccaggaaagaag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659 gaattcattagactgtgttaatcacagttgtagaacatataaatttaaccaggaaagaag 600
Query: 65 ataaactaatgcaaagatctcggtggtcttttgtatcataatgcataattgatggcaggt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 ataaactaatgcaaagatctcggtggtcttttgtatcataatgcataattgatggcaggt 540
Query: 125 tgtagtaatgacctaaatttaaagatacataaaaattccttcatattaaaatttcacccc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 tgtagtaatgacctaaatttaaagatacataaaaattccttcatattaaaatttcacccc 480
Query: 185 attgaatgtattaagtttaatctcaggtaaagtttttaaacctgatctcaaagaacatta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 attgaatgtattaagtttaatctcaggtaaagtttttaaacctgatctcaaagaacatta 420
Query: 245 aactcttcactttgtgaaccactccataaattacagagacatgatttgtggaagcctggt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 aactcttcactttgtgaaccactccataaattacagagacatgatttgtggaagcctggt 360
Query: 305 gcagtcaagtgggggtggttcctctcactccctagcccagtccgatgtcattctgacaca 364
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 359 gcagtcaagtgggggtggttcctttcactccctagcccagtccgatgtcattctgacaca 300
Query: 365 cctcaaaccaaaggatggcaattaagttgttctgggctggtagtgcagagtgagagccag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 cctcaaaccaaaggatggcaattaagttgttctgggctggtagtgcagagtgagagccag 240
Query: 425 tgtggagagctgtcagctggaatgattactcccca 459
||||||||||||||| |||||||||||||||||||
Sbjct: 239 tgtggagagctgtcaactggaatgattactcccca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space: 381201
Effective search space used: 381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_a23.g1 MSMg01no383_a23.g1 CHROMAT_FILE:
MSMg01no383_a23.g1 PHD_FILE: MSMg01no383_a23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:24:59 2005
(434 letters)
>mm_chr5_59041072_59041905
Length = 834
Score = 596 bits (308), Expect = e-174
Identities = 379/434 (87%), Gaps = 48/434 (11%)
Strand = Plus / Plus
Query: 1 accagtatcctggtacacctgcgcagctctcatgatgtttgtggtttatatgaggaagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 accagtatcctggtacacctgcgcagctctcatgatgtttgtggtttatatgaggaagtc 308
Query: 61 aggtgcaagtcatacgacttagctgcagtccctggcgcctttgggactgccgcctcaccc 120
||||| |||||||| |||||||||||||||||||| |||||||
Sbjct: 309 aggtgtaagtcataagacttagctgcagtccctggtgcctttg----------------- 351
Query: 121 gctcctcacatctcccccttttttcttttttggactgccaccacacccgctcctcacatt 180
|||||||||||||||||||||||||||||
Sbjct: 352 -------------------------------ggactgccaccacacccgctcctcacatt 380
Query: 181 gtactcatgtgctctttatctcagggatttcatttttgtgtagagtaagtttggattcct 240
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 gtactcatatgctctttatctcagggatttcatttttgtgtagagtaagtttggattctt 440
Query: 241 tttaaagtagcctttgttgataaaaatagtagaagggggatcaaatacctatggaaggag 300
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttaaagtagcctttgttgattaaaatagtagaagggggatcaaatacctatggaaggag 500
Query: 301 atacagagacaaagtttggagcagaaactgaaggaaagatcatccagtgactgtcacacc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atacagagacaaagtttggagcagaaactgaaggaaagatcatccagtgactgtcacacc 560
Query: 361 tgggaatccatctcatatagttatgaaatgcagacactattatggatgccaacaagtgct 420
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 561 tgggaatccatctcatatagttatgaaatgcagacgctattatggatgccaacaagtgct 620
Query: 421 tgctgacaggagcc 434
||||||||||||||
Sbjct: 621 tgctgacaggagcc 634
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 834
Length adjustment: 9
Effective length of query: 425
Effective length of database: 825
Effective search space: 350625
Effective search space used: 350625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
