Query= MSMg01no383_d07.b1 MSMg01no383_d07.b1 CHROMAT_FILE:
MSMg01no383_d07.b1 PHD_FILE: MSMg01no383_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:12 2005
(551 letters)
>mm_chr5_60973749_60974699
Length = 951
Score = 824 bits (426), Expect = 0.0
Identities = 459/470 (97%)
Strand = Plus / Minus
Query: 82 tatgcacacactgataagtggtttttagcccagaaacctagaatacccaagatataattt 141
|||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 951 tatgcacacactgatacgtggttattagcccagaaacctagaatacccaagatataattt 892
Query: 142 gcaaaacacaagaaaatgaagaaggaggaaaaccaacttgtggatacttcattcctcctt 201
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 891 gcaaaacacaagaaaatgaagaaggaggaagaccaacttgtggatacttcattcctcctt 832
Query: 202 agaatagggaataaaatacccatggaaggagttacagagacaaagtttggagctaagatg 261
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 831 agaatagggaataaaatacctatggaaggagttacagagacaaagtttggagctaagatg 772
Query: 262 aaaggatggactatccatagtgagcattttagaatgcaaaaatatccccaaagtgactaa 321
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 aaatgatggactatccatagtgagcattttagaatgcaaaaatatccccaaagtgactaa 712
Query: 322 gttcacctgaatggtgtaattcatatattgctcccaataattagcatattgaagagagaa 381
||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 711 gttcacctgaatggtataattcgtatattgctcccaataattagcatattgaagagagaa 652
Query: 382 ttacataacatgttgtctatcttaccactacttactgtagaataatctctagaatgatcc 441
||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 651 ttatataacatgttgtctatcttaccacaacttactgtagaataatctctagaatgatcc 592
Query: 442 acaatggatgtagaactctatagcccatttacaaaaatagacttaaatatataataagaa 501
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 acaatggatgtagaactgtatagcccatttacaaaaatagacttaaatatataataagaa 532
Query: 502 cacatgtctatttcaagcctttcttaattagtaaaatgtgactttttagt 551
||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 531 cacatgtctatttcaagtctttcttaattagtaaaatgtgactttttagt 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no383_d07.g1 MSMg01no383_d07.g1 CHROMAT_FILE:
MSMg01no383_d07.g1 PHD_FILE: MSMg01no383_d07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:12 2005
(525 letters)
>mm_chr5_60764799_60765722
Length = 924
Score = 992 bits (513), Expect = 0.0
Identities = 522/525 (99%), Gaps = 1/525 (0%)
Strand = Plus / Plus
Query: 1 tattttattttcaaaattaattagccataagcccctgattatcatcagtacttttccagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tattttattttcaaaattaattagccataagcccctgattatcatcagtacttttccagt 260
Query: 61 gagaaaaaaaatttaagtagctgatagtctatgtggttgtgctgcaatagatcctggaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagaaaaaaaatttaagtagctgatagtctatgtggttgtgctgcaatagatcctggaat 320
Query: 121 actaattaagcatcaagcagttaatgtaaagatggtttatatacttcattgatttgtttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 actaattaagcatcaagcagttaatgtaaagatggtttatatacttcattgatttgtttt 380
Query: 181 agacaatattatatttgttttccaattaagaactcatttgaatttgatgtggtagagaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agacaatattatatttgttttccaattaagaactcatttgaatttgatgtggtagagaaa 440
Query: 241 acagggctttttttttcccagattttaactattggtcataatcagcaaagaaaatattaa 300
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acagggctttttttt-cccagattttaactattggtcataatcagcaaagaaaatattaa 499
Query: 301 tacagagatcagtgtggtttgactctacattttaattattgtttatttcataaatgatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tacagagatcagtgtggtttgactctacattttaattattgtttatttcataaatgatgg 559
Query: 361 catttattatgtcacagatgagagtattgccattttccaaggcatgtgtatgacagctct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 catttattatgtcacagatgagagtattgccattttccaaggcatgtgtatgacagctct 619
Query: 421 cccagattagttgtgtaaggatttaataagtagaaagaatgggtgacagggccatggtgt 480
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 cccagattagctgtgtaaggatttaataagtagaaagaatgggtgacagggccatggtgt 679
Query: 481 cttgctgctaaatataaattgtatttaaagtaatatagccttcaa 525
||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 680 cttgctgctaaatataaattgtatttaaattaatatagccttcaa 724
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 924
Length adjustment: 10
Effective length of query: 515
Effective length of database: 914
Effective search space: 470710
Effective search space used: 470710
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
