CGAAGAGAAGCCGACCAATCCGGTAATGGAACAAGAGACAAAACAAGCAA
AAACAAAACAGAGAGGGAGGAATGAACACAACCAACCGCNTTTTTTAACT
TCCAAANAAAATCCCCCCCCCCCCCCCAATTCAACGGCCCCCTCTTNCAA
ATTCCAANACCCCCCCCCCNNNCCCTCCACCCCCGGGCCAACCCCCAAAC
CCCCCTNNATACCCCCCCCNCCCCTTCCCCCCCCCCCAACCCCCCAAAAT
CCCCCCCTCTTCCCCCTCTCTTCCAAAACCCCTACCCTCCCTTCCCCTCC
CCCCCCCCCCCCTCCCCCCCCTCCCCCTCCCCCCTTCTTTCCCCCCCNNN
NAACCCCTTTTTCTCCCCCCCCCCCCCCCCTCCCTCCCCCTTCCCTCTCC
CTTTTCCCCCCCCTTTCCCCCTTCCTCCTCCCCCCCCCCCTTTATTCCTT
GTGGGGATGAA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXTCCATTTCCCTGCCTCAGCCAAAGAGACCTGTCAAA
TTTTATGTGTAATTAACTAACTGAAAGTCCAATCTTTGGGCAGCCTAGAG
ATGACAAGAGAAACAAGGAAGACAGTGTGGTCCTCACCATGAATATACTT
CACCACGTTCACGCTCAGCCCGTGGCGGGAGATGGTCATTAGGACCTCCC
CCGCGCTCTTCCTCCATGGCAGGTTATAGGGGGGGCACCAAGAGGTTATT
GCACTGAATAAAAGCTGTAGGTCGTCCTTCTGGGCCAGCTCCTCCGCCGG
AGAAACAAAACTGCAGAGTTTTACTAAGATCTAAACACAAAGGAAAGGAG
AGAGTGCAACACAGAACCGTGATGGCAGGCAGGACAGAAGTGAGACCAAA
CATCACTCAGCTTCAGAGAGGGTGCTGGGTGGTCAGGATATCANGATCAC
TGCTTAACAATGTTACAAGGCATCTACAAAGTTACAAAGGGTCTAGGGAT
ATGTTAAAAAGGCCTTCTTAAAAAAAATTCCCTTTCCAGCTTCCTTATAC
CTTTGAAGGATCTTTTGGAACCGGAAAACAGCACACGTGGTTCTCTGGTT
GGTCCCAAAGGGTCCCCCTCCCCCCCCCCCTCCTCTTTGTGGTTTGGGAA
CCAAACCCCTATTTTTTACGTCCCGATATCACTTTAAAAAGGTATCCCGA
N

Query= MSMg01no385_m24.g1 MSMg01no385_m24.g1 CHROMAT_FILE:
MSMg01no385_m24.g1 PHD_FILE: MSMg01no385_m24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:29 2005
         (400 letters)



>mm_chr5_102381677_102382476
          Length = 800

 Score =  766 bits (396), Expect = 0.0
 Identities = 399/400 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tccatttccctgcctcagccaaagagacctgtcaaattttatgtgtaattaactaactga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccatttccctgcctcagccaaagagacctgtcaaattttatgtgtaattaactaactga 260

                                                                       
Query: 61  aagtccaatctttgggcagcctagagatgacaagagaaacaaggaagacagtgtggtcct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagtccaatctttgggcagcctagagatgacaagagaaacaaggaagacagtgtggtcct 320

                                                                       
Query: 121 caccatgaatatacttcaccacgttcacgctcagcccgtggcgggagatggtcattagga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 caccatgaatatacttcaccacgttcacgctcagcccgtggcgggagatggtcatgagga 380

                                                                       
Query: 181 cctcccccgcgctcttcctccatggcaggttatagggggggcaccaagaggttattgcac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctcccccgcgctcttcctccatggcaggttatagggggggcaccaagaggttattgcac 440

                                                                       
Query: 241 tgaataaaagctgtaggtcgtccttctgggccagctcctccgccggagaaacaaaactgc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgaataaaagctgtaggtcgtccttctgggccagctcctccgccggagaaacaaaactgc 500

                                                                       
Query: 301 agagttttactaagatctaaacacaaaggaaaggagagagtgcaacacagaaccgtgatg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agagttttactaagatctaaacacaaaggaaaggagagagtgcaacacagaaccgtgatg 560

                                                   
Query: 361 gcaggcaggacagaagtgagaccaaacatcactcagcttc 400
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcaggcaggacagaagtgagaccaaacatcactcagcttc 600


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 800
Length adjustment: 9
Effective length of query: 391
Effective length of database: 791
Effective search space:   309281
Effective search space used:   309281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)