CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTATTGTGGTCCAAGTGAATGACATGGGGAGTGGGGTCACTTGTTTC
AGGCCAGGCATCTAGCAGGGAGCAAGGAGACACCTACTGTCTCAGGTGGG
TTCCTGGGTGCTGGGGTCTCCAATTCACTCAACCTTACTAAGATTCCTGG
CACAGTCCATTGTCCCCCACACAAAGACCACCAGAAGAAAGTTACTTTCA
GTTCCGAAGGCCAGCAGAATACATTTACAGTTTTATATCAAGGATATATT
AACTCTTTACCATTGTGTCATAACTTACTTCAAAACAGTCTTGAGTGTAT
GTTGATTCCACGGAATATTACATTGTTCTACTGTATTGACTTTGTTGTGC
GGATTGAACCAAGTGAACAGGAGATAACCATTTAGGAACATCTGAATCCA
CCCACAATCAAGATAAAAGCACAATAGTTAGTCAACCTATTCAGATTTGG
AGACAGCACATTCCTCACTTGGGTGTGTTATTCTCACCCCCTAAACCAGA
GACTCATAAAGCTGCTAGCTTTGGATGGAACCTAAAACAGAAGAACCTTT
TTCACCCTCCAGGCTCTTATTACGGTTGCCTCACCCCCTTGGACCTCTTG
ATATTACCAAACCGCTAAGACCTTTAGGCTCCTGGGGGAAAAAAGAAGGC
TCTCTGGAACCCTTTGAAACCTCCTTCCACCAATTCCCATAAATCCCTTC
CGCTTTTTTCGACCCCGGCTTCC

NCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCAACTTTCAAGCCACCCCCCTGC
CTCAGCTAGGACTAATGACACTGAATTACCACCACTGTTTATTTTTATGC
TTACAGAGGCAAATCTGTTTGACAAAAACTGGTAAAATACCAGCTGCTTT
TCCTGATTGTTGTTATTTTAATGGTGACCTTCAGGGTGTAGAACAAAGGG
CTGACTGGTGACAGGACAGGGTGTGGAGTGTAAACAGACAAGGTGTCCAG
GATGTCTGTCCCTTTGCTCTTCCCTCTCTAGTGATCTTTTTGCATCTGCA
GTGAAGATGCTAGAAATGCTCTTTTCTTTTCCTTCTGATGCACTGGGAAG
AAAATTTGTAATTAGTTTGATTGGAATCTGATAAGCTGGAAGTGGCTTAC
GCCTCTTCCAAACATTTCATAAGTGATGATGCCTCAAAGGATGCTCTGTG
GACCTTCTGAGCATGTGTGTGGTTACCTTATATAGGAAATAATGTCAGAC
TTTAAAGCTCTCCTGAGCCCTACTGATCAGACTGTGGTTTTCTTCAGGGC
AAAGTATGTTGTAACCCCCCCCTTATGTTTTAAAAAAAATCCGGACCATT
GTTTTTTGCTTTTTGGTATACCAAACCCCCCCCGTGCGTTTTTAAAAAGA
CTGGTAATTCCTGTCTTTAACTCATTTTCCCCGGTTTCCCGATCTTCTCC
CGTTCCCCTAACTCCCCTTTCTCCC

Query= MSMg01no387_b18.g1 MSMg01no387_b18.g1 CHROMAT_FILE:
MSMg01no387_b18.g1 PHD_FILE: MSMg01no387_b18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:30:04 2005
         (459 letters)



>mm_chr5_26997907_26998765
          Length = 859

 Score =  727 bits (376), Expect = 0.0
 Identities = 439/460 (95%), Gaps = 2/460 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   caactttcaagccacccccctgcctcagctaggactaatgacactgaattaccaccactg 60
           |||||||| ||||| ||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 201 caactttcgagccatccccctgcctcagctaggactaatgacactgaattactatcactg 260

                                                                       
Query: 61  tt-tatttttatgcttacagaggcaaatctgtttgacaaaaactggtaaaataccagctg 119
           || || ||||||||||||||||||||| |||||||| |||||||||||| ||||||||||
Sbjct: 261 ttcta-ttttatgcttacagaggcaaacctgtttgagaaaaactggtaagataccagctg 319

                                                                       
Query: 120 cttttcctgattgttgttattttaatggtgaccttcagggtgtagaacaaagggctgact 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cttttcctgattgttgttattttaatggtgaccttcagggtgtagaacaaagggctgact 379

                                                                       
Query: 180 ggtgacaggacagggtgtggagtgtaaacagacaaggtgtccaggatgtctgtccctttg 239
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ggtgtcaggacagggtgtggagtgtaaacagacaaggtgtccaggatgtctgtccctttg 439

                                                                       
Query: 240 ctcttccctctctagtgatctttttgcatctgcagtgaagatgctagaaatgctcttttc 299
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 440 ctcttccctctctagtgatctttttgcatctgcagtgaaggtgctagaaatgctcttttc 499

                                                                       
Query: 300 ttttccttctgatgcactgggaagaaaatttgtaattagtttgattggaatctgataagc 359
           |||||| ||| ||||||| ||||||||||||||||||||||||  |||||||||| ||||
Sbjct: 500 ttttccatctaatgcacttggaagaaaatttgtaattagtttgcctggaatctgacaagc 559

                                                                       
Query: 360 tggaagtggcttacgcctcttccaaacatttcataagtgatgatgcctcaaaggatgctc 419
           |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tggatgtggcttacacctcttccaaacatttcataagtgatgatgcctcaaaggatgctc 619

                                                   
Query: 420 tgtggaccttctgagcatgtgtgtggttaccttatatagg 459
           || |||||||||||||| ||||||||||||||||||||||
Sbjct: 620 tgaggaccttctgagcacgtgtgtggttaccttatatagg 659


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space:   381201
Effective search space used:   381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)