Query= MSMg01no389_a17.b1 MSMg01no389_a17.b1 CHROMAT_FILE:
MSMg01no389_a17.b1 PHD_FILE: MSMg01no389_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:31 2005
(460 letters)
>mm_chr5_81934612_81935472
Length = 861
Score = 845 bits (437), Expect = 0.0
Identities = 455/461 (98%), Gaps = 1/461 (0%)
Strand = Plus / Minus
Query: 1 catttgccatttgcaaatcgctttggaaatgattttctgcctctgcttaaatacttttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 catttgccatttgcaaatcgctttggaaatgattttctgcctctgcttaaatacttttaa 602
Query: 61 tcctgaaagtatttttattgtccagtcatcctcggtaaatatgcttatctatttccttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcctgaaagtatttttattgtccagtcatcctcggtaaatatgcttatctatttccttaa 542
Query: 121 agtgatttcattgttgtccttcatcaagcataatgccataagctatatcctgtggctaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agtgatttcattgttgtccttcatcaagcataatgccataagctatatcctgtggctaga 482
Query: 181 gtaaatgacaaattcaaacaaaggacaactttattctctgcacaaggaagaccctgg-aa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 481 gtaaatgacaaattcaaacaaaggacaactttattctctgcacaaggaagaccctgggaa 422
Query: 240 aaaaagcctcctactatatttttcttttaaccttcaagggttcataaaacagatctacat 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aaaaagcctcctactatatttttcttttaaccttcaagggttcataaaacagatctacat 362
Query: 300 cggaggcatttgggttagaaaaataagatattgtcagctcaaactatttttgtataactc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cggaggcatttgggttagaaaaataagatattgtcagctcaaactatttttgtataactc 302
Query: 360 catatagaataccatggaattacattcttaaccagaagcagtatgaatcacagaccacac 419
|||||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||
Sbjct: 301 catatagaatactatggaattacattcttaaccagcagcagtatgaatcacagagcacac 242
Query: 420 aaatgcattgtcaaacgtcatcatactgcattgcaaattac 460
||||||||||||||||||||||||||||| ||||||||||
Sbjct: 241 gaatgcattgtcaaacgtcatcatactgcactgcaaattac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 861
Length adjustment: 10
Effective length of query: 450
Effective length of database: 851
Effective search space: 382950
Effective search space used: 382950
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no389_a17.g1 MSMg01no389_a17.g1 CHROMAT_FILE:
MSMg01no389_a17.g1 PHD_FILE: MSMg01no389_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:32:31 2005
(504 letters)
>mm_chr5_81764664_81765567
Length = 904
Score = 944 bits (488), Expect = 0.0
Identities = 500/504 (99%)
Strand = Plus / Plus
Query: 1 ctcagaaatgaaccttgattaatctcttgcctaattaaaactgattattaaaatagctta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcagaaatgaaccttgattaatctcttgcctaattaaaactgattattaaaatagctta 260
Query: 61 tccctctaagacagcgtaaagggatgctttatcttaaggaaagggttaatggtcttgttg 120
||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 tccctctaagacagcataaagggatgctttatcttaaggaaatggttaatggtcttgttg 320
Query: 121 gttaagagtttttaaaataaaatctccactcacaacagcttcactttgagagttgctggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttaagagtttttaaaataaaatctccactcacaacagcttcactttgagagttgctggt 380
Query: 181 ccatagctgtgcttgcaaagctcacgcagtttggcatgggaggtgctacagtgactaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccatagctgtgcttgcaaagctcacgcagtttggcatgggaggtgctacagtgactaaag 440
Query: 241 ctagcatagtaagagaggcagacattcgcttgctgtgttacatgtaaaaccatgatttgg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctagcatagtaagagaggcagacattcgcttgctgtgttacatgtaaaaccatgatttgg 500
Query: 301 gaattcagccagttcctttggataccacaaagtcactagcttgattgagcaagtcataga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaattcagccagttcctttggataccacaaagtcactagcttgattgagcaagtcataga 560
Query: 361 tcctaagataaatgaagaacatagtcgactgcatacaaaatgctttgaaatcttcaaaag 420
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 561 tcctaagataaatgaagaacatagttgactgcatgcaaaatgctttgaaatcttcaaaag 620
Query: 421 ccagaatgctaatgagaaaagacttatagtcagacagcagcatttttcttaacttagatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccagaatgctaatgagaaaagacttatagtcagacagcagcatttttcttaacttagatc 680
Query: 481 ccatcctaacaactatattctttc 504
||||||||||||||||||||||||
Sbjct: 681 ccatcctaacaactatattctttc 704
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
