Query= MSMg01no389_h08.b1 MSMg01no389_h08.b1 CHROMAT_FILE:
MSMg01no389_h08.b1 PHD_FILE: MSMg01no389_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:04 2005
(361 letters)
>mm_chr5_73424632_73425392
Length = 761
Score = 683 bits (353), Expect = 0.0
Identities = 359/361 (99%)
Strand = Plus / Minus
Query: 1 agtaatttcagttgcaacacttctttacataaaagagggggaagatgtatgtgtgtgaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agtaatttcagttgcaacacttctttacataaaagagggggaagatgtatgtgtgtgaga 386
Query: 61 aatgctaaccttttctcatactttcctcatagacaattcaaaggaagtttggagagataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aatgctaaccttttctcatactttcctcatagacaattcaaaggaagtttggagagataa 326
Query: 121 cgaaggaggctgtgggctttcttggtgagagtctacagcgcattggtaccaagtttaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cgaaggaggctgtgggctttcttggtgagagtctacagcgcattggtaccaagtttaaaa 266
Query: 181 gctcattggaagtgatgatggcctgttctgaatgccccactgtctttgtggatgccgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gctcattggaagtgatgatggcctgttctgaatgccccactgtctttgtggatgccgaaa 206
Query: 241 cggtaagccaggcgtgatggtgcccaggtggaaataaatgccagtactcggaaggctgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 cggtaagccaggcgtgatggtgcccaggtggaaataaatgccagtactcggaaggctgag 146
Query: 301 ggcggatacgtccgaggccagcccggggtgtataatgagttccaagccagccacctctct 360
|||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 145 ggcggacacgtccgaggccagcccagggtgtataatgagttccaagccagccacctctct 86
Query: 361 a 361
|
Sbjct: 85 a 85
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 761
Length adjustment: 9
Effective length of query: 352
Effective length of database: 752
Effective search space: 264704
Effective search space used: 264704
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no389_h08.g1 MSMg01no389_h08.g1 CHROMAT_FILE:
MSMg01no389_h08.g1 PHD_FILE: MSMg01no389_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:04 2005
(504 letters)
>mm_chr5_73300093_73300996
Length = 904
Score = 870 bits (450), Expect = 0.0
Identities = 485/504 (96%), Gaps = 12/504 (2%)
Strand = Plus / Plus
Query: 1 tgcgtagatgtggcagtttggacatttaattccagtactcaggaggcatatttgcgctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 tgcgtagatgtggcagtttggacatttaattccagtactcaggaggcatatttgcgctca 272
Query: 61 aagccagtctgatctacagagtgggttccaggccagctaggtctggatgctgagactaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 aagccagtctgatctacagagtgggttccaggccagctaggtctggatgctgagactaga 332
Query: 121 aacattcctggagactgggcttggtggtgcacacctttaatcccagtactctggaggtag 180
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 333 aacattcctggagactgggcttggtagtgcacacctttaatcccagtactctggaggtag 392
Query: 181 aggcaggtggatctctgtgagttcaaggccagtttggtgtacaaaaaaagattgaagcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 aggcaggtggatctctgtgagttcaaggccagtttggtgtacaaaaaaagattgaagcca 452
Query: 241 gttagggtctttctgtgacaccctgtctcaaagcaccaaaataaatggagaaagaaaatt 300
||||||| | | | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 gttagggccatacagtgacaccctgtctcaaagcaccaaaataaatggagaaagaaaatt 512
Query: 301 agaaaggccctatctcaaaacaccaaaataaatggagagagagagagagagacagagaga 360
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 agaaaggccctatctcaaaacaccaaaataaatggagagagagagaga------------ 560
Query: 361 cagagagaaattagttccttgaattctttttttaaaaacatattttcccaaagaggcccc 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 561 cagagagaaattagttccttgaattctttttttaaaaacatattttcccaaagacgcccc 620
Query: 421 agatagaccaaagggaggcacatctggaggaaggacgctgttgaaggacagatgcaagac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agatagaccaaagggaggcacatctggaggaaggacgctgttgaaggacagatgcaagac 680
Query: 481 gaccggaggaaatgactgaccaag 504
||| ||||||||||||||||||||
Sbjct: 681 gacaggaggaaatgactgaccaag 704
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
