NNAAATCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAAATCCGC
GGAATTCAATCTCTTCTTCCGAAAGTACCAGGAGAAGACTGACTCCCACA
TGGATAGGAGGGTCTCATTGCCCATGCCTACAATGACATACTTCTTCCAA
CAAGACCAAACCTACTTTAACACAGCCACACCTCCTCATAGTGTCACTCC
CTAGACCAAGCATATACAAACCACTACACCTGGGAAACTCACCCCGTGTT
TTTCCTCCAGAGAAAATAAAGTATATGCATGCAAAAATTATAGAAGCTTT
TTTTTAACTAACCAAAAACTTGAAAGACCCCTCAAATGCCCATTGATGTA
TAAAGAAATTGTGATAAATCCATGCAATGACAAATATATTCATCAATAAA
AGGAAACCAATATATGTGACAGCATGGATAAATACCATGTGTGTTACGAT
GAATGAATAAAGTCAGACTCAAAAGGCTACAGATTATGTGCCCCATTTAA
ACAGTCATCTGAAATGGATGAAAATCCATAGCTGCAAGAGAAGCAGTGAA
AGGGTTGATAACAAAGGGGCATGAGGAATGTAAAGGGATGGAAATGTTCT
CTGTCCAAGTTGTGATAGTCCCTGACCTTATGCACTTGTCAAAACAAGCA
GAGCCACCGAAACCAGCCCAAGAGACTGGAAAGCTGGACTAAAATTCAAA
CCCCCTCTCCCACATGTGGAAGAACTCGAAAGCTTGCTTTAAAACTGGCC
C

NNNCCCGATGATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAGTTTTGAGGAGAACCACATGTCT
TTCTTTTTGTTTGTTTTTTTAAGATTGGCCAATCTGAAGTTTACCTCATC
AGTCCTGACACCAAAAAGATTGCACTGGAGAAAAATTTTAAGGAGATATC
CTTTTGCTCTCAGGTAAATTCACGGGGATTATCGATTTAATTAGGCAGGG
GAGGGGGATGGACTAGGGGGGTTCCGGAGGGGAGACCTGGAAAGGGGAAA
ACATTTGAAATGCAAATCAAGAAAATATTCTAATGTATGCAGTAGACATG
CTATTGTGTAAAAACAAAGCATGCTTTTGATGCTTGATTGGTGGTCTCTG
TCTTACAGTGTAAGGCAAATTATAATCTTGAAATTAACAATTTTGCTTTT
TTGGAGCAATGTACTGGAGAAAATAGGTCTACCTTCCTTTCTTTTCCCTG
TTATTGGTACTTATATTGTATTATTTATACTTGGTATGCATGTGTGTGCC
CATGTTTTATATATAATTGACATATATGTGTGCATATGGCTTATACATAA
TTATATATGCGNATTTTATATATAAAGTGGTAGAGAAACATATTTCTACT
TTCTTGAAGCTCCCAATTTTTATGTTGGCATTATTTCTTCCGCGGACTGG
GGGAGAAGAAACCTATCTTTTGAGGAGGTTTTCCCCCCCGAGGCGTGTGC
ACTCTAA

Query= MSMg01no390_p21.g1 MSMg01no390_p21.g1 CHROMAT_FILE:
MSMg01no390_p21.g1 PHD_FILE: MSMg01no390_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:35:04 2005
         (516 letters)



>mm_chr5_64651345_64652256
          Length = 912

 Score =  690 bits (357), Expect = 0.0
 Identities = 403/419 (96%), Gaps = 4/419 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   agttttgaggagaaccacatgtctttctttttgtttgtttttttaagattggccaatctg 60
           |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 agtttttaggagaaccacatgtctttctttttgtttgtgtttttaagattggccaatctg 260

                                                                       
Query: 61  aagtttacctcatcagtcctgacaccaaaaagattgcactggagaaaaattttaaggaga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagtttacctcatcagtcctgacaccaaaaagattgcactggagaaaaattttaaggaga 320

                                                                       
Query: 121 tatccttttgctctcaggtaaattcacggggattatcgatttaattaggcaggggagggg 180
           ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 321 tatccttttgctctcaggtaaattcacagggattattgatttaattaggcaggggagggg 380

                                                                       
Query: 181 gatggactaggggggttccggaggggagacctggaaaggggaaaacatttgaaatgcaaa 240
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 gatggactaggggggttccggaggggagacctggaaaggggaaaacatttgaaatgtaaa 440

                                                                       
Query: 241 tcaagaaaatattctaatgtatgcagtagacatgctattgtgtaaaaacaaagcatgctt 300
           |||||||||||| |  ||| ||||||||||||| | || |||||||||||||||||||||
Sbjct: 441 tcaagaaaatatcccgatggatgcagtagacatac-at-gtgtaaaaacaaagcatgctt 498

                                                                       
Query: 301 ttgatgcttgattggtggtctctgtcttacagtgtaaggcaaattataatcttgaaatta 360
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 499 ttgatgcttgattggtggtctctgtcttacagtgtaaggcaaattataatcttgaagtta 558

                                                                      
Query: 361 acaattttgcttttttggagcaatgtactggagaaaataggtctaccttcctttctttt 419
           ||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||
Sbjct: 559 acaattttgcttttttggagcaat--actggagaaaataggtctgccttcctttctttt 615


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 912
Length adjustment: 10
Effective length of query: 506
Effective length of database: 902
Effective search space:   456412
Effective search space used:   456412
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)