Query= MSMg01no393_n13.b1 MSMg01no393_n13.b1 CHROMAT_FILE:
MSMg01no393_n13.b1 PHD_FILE: MSMg01no393_n13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:59 2005
(508 letters)
>mm_chr5_33337015_33337923
Length = 909
Score = 911 bits (471), Expect = 0.0
Identities = 500/510 (98%), Gaps = 3/510 (0%)
Strand = Plus / Plus
Query: 1 tcaggcagctcctagccttaaa-ctataaccacatgcttgccctaaacatagctgagagt 59
|||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||
Sbjct: 201 tcaggcagctcctagccttaaaactataaccacatgcttgccctaaacatagccgagagt 260
Query: 60 gctctccaattctaggttttgcttgtccaaaagcatgtgccaagagtaggtcttacagcc 119
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 gctctccaattctagcttttgcttgtccaagagcatgtgccaagagtaggtcttacagcc 320
Query: 120 ttcagatctgacctctatctggtggcagcagaatcatctgtttctgatgaattggcttat 179
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 ttcagatctggcctctatctggtggcagcagaatcatctgtttctgatgaattggctcat 380
Query: 180 atttcttccaagaagaggatcccgaccactgagcagaatgtggagagggtctgtgagatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttcttccaagaagaggatcccgaccactgagcagaatgtggagagggtctgtgagatt 440
Query: 240 ccttgcaacccctttttcctctgagccttgggattcttttgtgatctcacttggctgcaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccttgcaacccctttttcctctgagccttgggattcttttgtgatctcacttggctgcaa 500
Query: 300 gaaaccatggagactgagagtgcagacctcttccttctcctgata-ctatgctgtctata 358
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 501 gaaaccatggagactgagagtgcagacctcttccttctcctg-taactatgctgtctata 559
Query: 359 agagttaaccctcagcctttagctccccagaaacctgtagcagttgccactagaacctcg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 agagttaaccctcagcctttagctccccagaaacctgtagcagttgccactagaacctcg 619
Query: 419 attcttagcaccgtgcttttgaattatatcaaattgctgatccaagttcagttctcccat 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 attcttagcaccgtgcttttgaattatatcaaattgctgatccaagttcagttctcccat 679
Query: 479 ccaatattcctcanatgtctgcaaagagac 508
||||||||||||| |||||| |||||||||
Sbjct: 680 ccaatattcctcaaatgtctccaaagagac 709
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 909
Length adjustment: 10
Effective length of query: 498
Effective length of database: 899
Effective search space: 447702
Effective search space used: 447702
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no393_n13.g1 MSMg01no393_n13.g1 CHROMAT_FILE:
MSMg01no393_n13.g1 PHD_FILE: MSMg01no393_n13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:38:59 2005
(151 letters)
>mm_chr5_33510091_33510642
Length = 552
Score = 213 bits (110), Expect = 5e-60
Identities = 142/154 (92%), Gaps = 5/154 (3%)
Strand = Plus / Minus
Query: 1 atttaggaattcatttatatcagct--gagtcagatgccttattctttgagctttattta 58
||||| ||||||||||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 301 attta-gaattcatttatatcagctgagagtcagatgccttattctttgagttttattta 243
Query: 59 aatactttgctttttatcattatcaatttggttgtgcatgtgccttcgtgcatgtgtgca 118
|||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||
Sbjct: 242 aatactttgctttttatcattatcaatttggttgtgcatgtgtctgcatgcatgtgtgca 183
Query: 119 tgtgtg--tgtgtgtgtgtgtgtgtatgtatgtg 150
|||||| ||||||||||| ||||| ||| ||||
Sbjct: 182 tgtgtgcatgtgtgtgtgtctgtgtgtgtttgtg 149
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 151
Length of database: 552
Length adjustment: 8
Effective length of query: 143
Effective length of database: 544
Effective search space: 77792
Effective search space used: 77792
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
