Query= MSMg01no394_k16.b1 MSMg01no394_k16.b1 CHROMAT_FILE:
MSMg01no394_k16.b1 PHD_FILE: MSMg01no394_k16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:40:08 2005
(408 letters)
>mm_chr5_84082580_84083389
Length = 810
Score = 756 bits (391), Expect = 0.0
Identities = 404/409 (98%), Gaps = 2/409 (0%)
Strand = Plus / Minus
Query: 1 caattataaacaattttgtcaattaacctgctaaaatggagctacctatgggctgtctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 caattataaacaattttgtcaattaacctgctaaaatggagctacctatgggctgtctac 550
Query: 61 tacgtg--ccagggttggttttttggctgattctttcaaaatgcagatgctaatttcctg 118
|||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 549 tacgtgctccagggttggttttttggctgcttctttcaaaatgcagatgctaatttcctg 490
Query: 119 ctacattgcagcagggttctgttcaaggtaatgcatttgttgaagcttcagtgggttaat 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ctacattgcagcagggttctgttcaaggtaatgcatttgttgaagcttcagtgggttaat 430
Query: 179 agcctgctaccatgctagcattttctgtccagttacatctggtatacattttgtaaccct 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 agcctgctaccatgctagcattttctgtccagttacatctggtatacattttgtaaccct 370
Query: 239 taacttcctttattttcacacactcacctaaagactaaaactaagcatatggcttctgaa 298
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 taacttccttcattttcacacactcacctaaagactaaaactaagcatatggcttctgaa 310
Query: 299 aaaaattttcagataattacaaatgaaaaaatgttagtccatcatgtcatttagagacta 358
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 aaaaattttcagataattagaaatgaaaaaatgttagtccatcatgtcatttagagacta 250
Query: 359 ttcctctggcatcttaatagaatctttggcacaatccttttcttgctgg 407
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ttcctctggcatcttaatagaatctttggcacaatccttttcttgctgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 810
Length adjustment: 9
Effective length of query: 399
Effective length of database: 801
Effective search space: 319599
Effective search space used: 319599
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no394_k16.g1 MSMg01no394_k16.g1 CHROMAT_FILE:
MSMg01no394_k16.g1 PHD_FILE: MSMg01no394_k16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:40:08 2005
(335 letters)
>mm_chr5_83906551_83907285
Length = 735
Score = 596 bits (308), Expect = e-175
Identities = 326/332 (98%), Gaps = 2/332 (0%)
Strand = Plus / Plus
Query: 1 cccatctgttaataattacatactttaacaatatattaagtgctatcattgacaaaactg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cccatctgttaataattacatactttaacaatatattaagtgctatcattgacaaaactg 260
Query: 61 aaccgaaacatcttatttaagacataattaagcatcacagtttatcattttgtgactata 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacggaaacatcttatttaagacataattaagcatcacagtttatcattttgtgactata 320
Query: 121 acaagcatgaaagtccaatcacaggaaaggagaaagataaggaagatattctgctaatca 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 acaagcatgaaagtccaatcacaggaaaggagaaagataaggaagatattcttctaatca 380
Query: 181 gcacgaaattagtgctacattaaagaaaatgctaggtatgtatgtatgttgtatatattt 240
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 381 gcacgaaattagtgctacattaaagaaaatgctaagtatgtatgtatgttgtatatattt 440
Query: 241 aacttttattgctatttttttcacacttgcaatattactagggaaatcattatacaagtt 300
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatttttattgctatttttt-cacacttgcaatattactagggaaatcattatacaagtt 499
Query: 301 ttaaaggtttatttttaattact-tgtgtgtg 331
||||||||||||||||||||||| ||||||||
Sbjct: 500 ttaaaggtttatttttaattactgtgtgtgtg 531
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 735
Length adjustment: 9
Effective length of query: 326
Effective length of database: 726
Effective search space: 236676
Effective search space used: 236676
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
