Query= MSMg01no394_n19.b1 MSMg01no394_n19.b1 CHROMAT_FILE:
MSMg01no394_n19.b1 PHD_FILE: MSMg01no394_n19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:40:24 2005
(440 letters)
>mm_chr5_3810007_3810846
Length = 840
Score = 841 bits (435), Expect = 0.0
Identities = 438/439 (99%)
Strand = Plus / Minus
Query: 1 caagtaagagtaaggaataatattttctctatataaatataattaaatcttaaagattaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 caagtaagagtaaggaataatattttctctatataaatataattaaatcttaaagattaa 438
Query: 61 ttcaaagtctcaaaattaattataggatctgcactgaaaatcaaaattgctttctactat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ttcaaagtctcaaaattaattataggatctgcactgaaaatcaaaattgctttctactat 378
Query: 121 tctaagatttcaaaagctcaatttaaaattctttagtagatctgttctatacgtgttata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tctaagatttcaaaagctcaatttaaaattctttagtagatctgttctatacgtgttata 318
Query: 181 aatattattaagcagaataatttagaactatagttagcatttcctggcatcattataagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 aatattattaagcagaataatttagaactatagttagcatttcctggcatcattataagt 258
Query: 241 tatatctatttctgtcatatcctttgaaaatttgctttatgaccagaatactttaatttt 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tatatctatttctggcatatcctttgaaaatttgctttatgaccagaatactttaatttt 198
Query: 301 aattttattttatgtgtatgaatactttgcttgcaagtatgtctggctagccatgtgtat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 aattttattttatgtgtatgaatactttgcttgcaagtatgtctggctagccatgtgtat 138
Query: 361 gcctggtaccttcagagaccagcagacagtgttggatcccctgaaactggagttactgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 gcctggtaccttcagagaccagcagacagtgttggatcccctgaaactggagttactgat 78
Query: 421 ggttgtgacccattgtttg 439
|||||||||||||||||||
Sbjct: 77 ggttgtgacccattgtttg 59
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space: 358161
Effective search space used: 358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no394_n19.g1 MSMg01no394_n19.g1 CHROMAT_FILE:
MSMg01no394_n19.g1 PHD_FILE: MSMg01no394_n19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:40:24 2005
(188 letters)
>mm_chr5_3657400_3657987
Length = 588
Score = 364 bits (188), Expect = e-105
Identities = 188/188 (100%)
Strand = Plus / Plus
Query: 1 ccaactgagctgaatcagaataatgatcaatcacatttgtagtatttctgtccagtcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ccaactgagctgaatcagaataatgatcaatcacatttgtagtatttctgtccagtcaga 260
Query: 61 gtgagggtgaatgttaatgtgatcctcctaaatattatccttaaattttattttcaaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgagggtgaatgttaatgtgatcctcctaaatattatccttaaattttattttcaaaat 320
Query: 121 tcaaaactatagcatagtaaagttcacattggtgcatatatatgtatgtgtatgtatatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaaaactatagcatagtaaagttcacattggtgcatatatatgtatgtgtatgtatatg 380
Query: 181 gtgttttt 188
||||||||
Sbjct: 381 gtgttttt 388
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 188
Length of database: 588
Length adjustment: 8
Effective length of query: 180
Effective length of database: 580
Effective search space: 104400
Effective search space used: 104400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
