Query= MSMg01no395_m15.b1 MSMg01no395_m15.b1 CHROMAT_FILE:
MSMg01no395_m15.b1 PHD_FILE: MSMg01no395_m15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:44 2005
(277 letters)
>mm_chr5_81141632_81142309
Length = 678
Score = 480 bits (248), Expect = e-140
Identities = 272/286 (95%), Gaps = 11/286 (3%)
Strand = Plus / Plus
Query: 3 gattggatcattgaggaacaatattcattagtcgaatatcacctaatctgtgtgagctat 62
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 193 gattggatcattgaggaacaatattcattagtcgaatatcacctaatctgtgcgagctat 252
Query: 63 ggcaaagcatccttggtctctaaaagtaaactcaaacaaaaatgttctacacacacacac 122
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 253 ggcaaagcatccttggtctctaaaagtaaactcaaacaaaaatgttttacacacacacac 312
Query: 123 acacacacacacacaca----------agcatggactaaaaaaaa-tgaatgctagaaga 171
||||||||||||||||| |||||||| ||||||||| ||||||||||||||
Sbjct: 313 acacacacacacacacacacaaacacaagcatggattaaaaaaaaatgaatgctagaaga 372
Query: 172 cctggatgatgaagcaatattaaccactataatacacagtttaccaaactgtaaactcaa 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 cctggatgatgaagcaatattaaccactataatacacagtttaccaaactgtaaactcaa 432
Query: 232 tacaatcattccaactctatatgactaaattgaagtttataaaata 277
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tacaatcattccaactctatatgactaaattgaagtttataaaata 478
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 678
Length adjustment: 9
Effective length of query: 268
Effective length of database: 669
Effective search space: 179292
Effective search space used: 179292
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no395_m15.g1 MSMg01no395_m15.g1 CHROMAT_FILE:
MSMg01no395_m15.g1 PHD_FILE: MSMg01no395_m15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:44 2005
(240 letters)
>mm_chr5_81360812_81361450
Length = 639
Score = 449 bits (232), Expect = e-131
Identities = 238/240 (99%), Gaps = 1/240 (0%)
Strand = Plus / Minus
Query: 1 ccacttcttggaaggccttgacaaatgaatttaaggcacattggagctatagagtgattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ccacttcttggaaggccttgacaaatgaatttaaggcacattggagctatagagtgattt 380
Query: 61 taaggatgagttgggtaacttagatttgtctttttattttattactgtgatagtttattt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 379 caaggatgagttgggtaacttagatttgtctttttattttattactgtgatagttta-tt 321
Query: 121 ttaattacatgtacatgtgactatctgtggataggtatgtgcacctgagtgcagtgcctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttaattacatgtacatgtgactatctgtggataggtatgtgcacctgagtgcagtgcctg 261
Query: 181 tcgatggtgccagatgatggtgtcaggtgccctggggcttggacgaaatttgggttctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tcgatggtgccagatgatggtgtcaggtgccctggggcttggacgaaatttgggttctct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 639
Length adjustment: 9
Effective length of query: 231
Effective length of database: 630
Effective search space: 145530
Effective search space used: 145530
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
