Query= MSMg01no396_j23.b1 MSMg01no396_j23.b1 CHROMAT_FILE:
MSMg01no396_j23.b1 PHD_FILE: MSMg01no396_j23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:48 2005
(440 letters)
>mm_chr5_41594219_41595059
Length = 841
Score = 822 bits (425), Expect = 0.0
Identities = 437/441 (99%), Gaps = 1/441 (0%)
Strand = Plus / Minus
Query: 1 gaggaaaggaaaggaagaagtgatataattatatgttacttaaaaaattaaaagtttaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gaggaaaggaaaggaagaagtgatataattatatgttacttaaaaaattaaaagtttaaa 392
Query: 61 agtatatttgctatgataattgcttacattgctatatagcaataaaaacatttgaaaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 agtatatttgctatgataattgcttacattgctatatagcaataaaaacatttgaaaaat 332
Query: 121 g-aaaaaaaagtcttacaaattatagtgttgaaaatgtctatagttcagatttgcaattg 179
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gaaaaaaaaagtcttacaaattatagtgttgaaaatgtctatagttcagatttgcaattg 272
Query: 180 gcacaaacctgcagctccatctccggtttggccagtttagagtcataaagcgttgatggc 239
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 271 gcacaaacctgcagctccatctccggtttggccagtttagagtcatgaagcgttgatggc 212
Query: 240 tccaattcaccctgacttttcactctgcaagctgactcgggtcagttctgcaaggctgta 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 211 tccaattcaccctgacttttcactctgcaagctgactcgggtcagttctgcaaggctgta 152
Query: 300 tggagctcttggctcttgaatgcctttcattagccaatgcaatatggagtttttctaata 359
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 151 tggagctcttggctcttgaatgcctttcgttagccaatgcaatatggagtttttctaata 92
Query: 360 agatgcttttacgactcttcacttgaaaactaataagtgaaagaactcactgtgccttaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 91 agatgcttttacgactcttcacttgaaaactaataagtgaaagaactcactgtgccttaa 32
Query: 420 tttaaaatattctatttccag 440
||||||||||||| |||||||
Sbjct: 31 tttaaaatattctctttccag 11
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 841
Length adjustment: 9
Effective length of query: 431
Effective length of database: 832
Effective search space: 358592
Effective search space used: 358592
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no396_j23.g1 MSMg01no396_j23.g1 CHROMAT_FILE:
MSMg01no396_j23.g1 PHD_FILE: MSMg01no396_j23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:48 2005
(464 letters)
>mm_chr5_41428447_41429310
Length = 864
Score = 897 bits (464), Expect = 0.0
Identities = 464/464 (100%)
Strand = Plus / Plus
Query: 1 actttgtgaactctgggaacagaaccctagtcattcagaaaagctgccagtttcacggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actttgtgaactctgggaacagaaccctagtcattcagaaaagctgccagtttcacggat 260
Query: 61 acactattaaaaaggctttgtgtaacaggccctctaagacttctcagttgcactaaaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acactattaaaaaggctttgtgtaacaggccctctaagacttctcagttgcactaaaatc 320
Query: 121 tcatctcagtgaagatcagaatacagttgaggccttttcacacattccttcagaaagatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcatctcagtgaagatcagaatacagttgaggccttttcacacattccttcagaaagatt 380
Query: 181 taaatatctaatacttttggttcaagaaagaaagattacttataatgaagatgcaaagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaatatctaatacttttggttcaagaaagaaagattacttataatgaagatgcaaagaa 440
Query: 241 acatatctgagtgaagagccatgacatataaaaaaaaactgcaggtaacacaagaggtta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acatatctgagtgaagagccatgacatataaaaaaaaactgcaggtaacacaagaggtta 500
Query: 301 catggagagaagataaagtaggaggataaatatttaaggaaatcattttattaaatttac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catggagagaagataaagtaggaggataaatatttaaggaaatcattttattaaatttac 560
Query: 361 caacaaattacaataaaaataataatagaatgtaaggaaaagattaaaaatgaggctgcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caacaaattacaataaaaataataatagaatgtaaggaaaagattaaaaatgaggctgcc 620
Query: 421 actcctcattgccccatcaatgatgcttaagtttttcataagga 464
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 actcctcattgccccatcaatgatgcttaagtttttcataagga 664
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 864
Length adjustment: 10
Effective length of query: 454
Effective length of database: 854
Effective search space: 387716
Effective search space used: 387716
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
