CGGCGCTTTACGACTCACTATATTCAGAGGATCCGCGGAATTCCCTCTTT
TTGCCCATCTTCTGAAGGGGAGATCCTTCAGATGAGGCATTCTGGAACCC
AAAGGGGATTGTCTTCTTCCTGTGGAAAGACACAAATAACTCCTTTGGAT
CTTATTAAAATAGGATGCAGGCCTCTACATTTTCCAGTTAAGACAACTTT
CCATTTGATAATTTCTCTAGATCTGTTTGGTTCTGAACAGTGATGATCAG
CTGCAGTGTGGCCTTGCTCATCAATATTCAAAAAATTAAGAGTAAAGAGT
ACCATGGAGATGTCCACTCTCAGTGTTAAGGGTAAGAGCCTCATCGACTC
ACCCTTTCTTTTTGATAAGGTAAATTTTAACAGCGTGGTGGGCACGTTCC
ACAATGTCTTGTCCCTGTATGGCAAACCAGTTAAATAAGTTAAATTCCTC
TGTAGACCGAATTGTTGAATATTTTGAGAGGTGTAGGCCAGTCCTTTATC
TGTTCTAACATATTTGGTGCGTCCCCATGCACTCCAAGCTTCAAGGCTAA
GTTGATTTACATGTGTGGCTTTTTTCTTATTAGAGTATCCCGATCTACTG
CCCTCCTTTTTCTCACCTCCTTTTTTTTGACACACTGGGGAGGGTCCTTT
TTTCTAACACACGGCCATTCATTTTTTTCCAGCCATTTTTACCCCTCCCT
CCGGTTTATTCCTTCTCTCACCTCACCGGTTCCGCTACCCCCTTTCTCGT
TTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXCAGAAAGCAATTTAGTAAATTTGATTAATGTCTCC
TTACATCACATAGATATTTTCTACAGTGCATATAAGCACATATATTTTAG
AATATACTGAAACTTAAAAATGTAAATTAAAAAAAAAACAAAAACCTCTA
CCAACTTCAAATTAAAAAACACATTTATTTTAGAATTCTCTAGGATACTC
GTAATTTCCTGTATTCCCTACTCATGATGTCCATATGTTAGCATCTTACA
AATTTGTATGACATTATTGAGGAGAAAATAAAATTTGTAAGGAAAAAAAA
AAGACAGTTTTGTCTTAGACTACTTATTAACAAATGCCTGGGCCACAAAC
TGTGGCTTATTCCCAGAATAACGTATTTAACACATTCAAAATATTTTATG
TTTTGTACATTTTTAGTTACCCCTTTATCTATTTACTTAGCATCTTCCTA
AATATCTCCCTTAGCATATGTGCCAGCATCTGTCCCTGAATCTGTTTATT
CTCCTAATATTTCATAGAATACTCTCTTTTTGAAAAGTCTCACCTCATAT
TTTCTTCCTCAGCTCATTTGTCATACACATTATTTAATTGACAGATGAAT
GTTATAAAAGAAGCCCAAAATTTGGGGTACTAAATAACACTAAAAATCCC
TCTTACAAATAAAAAGTAGGCTCTGTGTACG

Query= MSMg01no396_k02.g1 MSMg01no396_k02.g1 CHROMAT_FILE:
MSMg01no396_k02.g1 PHD_FILE: MSMg01no396_k02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:48 2005
         (521 letters)



>mm_chr5_126312539_126313458
          Length = 920

 Score =  215 bits (111), Expect = 7e-60
 Identities = 386/503 (76%), Gaps = 61/503 (12%)
 Strand = Plus / Plus

                                                                       
Query: 31  tctccttacatcacata-gatattttctacagt-gcat---ataagcacatatattttag 85
           ||||||||||||||| | || ||||||||| || | ||   |||| ||||||||||||||
Sbjct: 234 tctccttacatcaca-aggacattttctactgtag-atataataaacacatatattttag 291

                                                                       
Query: 86  aatatactgaaactt-aaaaatgtaaattaaaaaaaaaacaaaaacctctaccaacttca 144
           ||||||| ||||||| ||||||| ||||  ||||      ||| ||||||||| ||||  
Sbjct: 292 aatatacagaaacttgaaaaatggaaatggaaaa------aaatacctctaccgactttg 345

                                                                       
Query: 145 aattaaaaaacacatttattttagaattctctaggatactcgtaatttcctgtattccct 204
           |||||||||||||||||||||||||||||||||||||| | | ||||||| | || ||||
Sbjct: 346 aattaaaaaacacatttattttagaattctctaggatagttgcaatttcccgcataccct 405

                                                                       
Query: 205 actcatgatgtccatatgttagcatcttaca-aatttgtatgacatta-ttgaggagaaa 262
           || |||||| ||||||| ||||||||||||| |||  |||||| | || || ||||||||
Sbjct: 406 acacatgatttccatatattagcatcttacataatc-gtatgaaaataatt-aggagaaa 463

                                                                       
Query: 263 ataaaatttgtaaggaaaaaaaaaagacagtttt---------gt--ct--t-------- 301
            |||  |||||||    ||||||||  | |||||         ||  ||  |        
Sbjct: 464 ttaacctttgtaa----aaaaaaaatcc-gtttttccttccctgttcctgctccctgaat 518

                                                                       
Query: 302 ----------agactacttattaacaaatgcctgggccacaaactgtggcttattcccag 351
                     |||||| |||||||||||||||| |||||||| || |||||  ||||  |
Sbjct: 519 gacgactctgagactatttattaacaaatgcctaggccacaagctttggctccttcctgg 578

                                                                       
Query: 352 aataacgtatttaacacattcaaaatattttatgttttgtacatttttagttacc-c-ct 409
           | |||| |||||||| |||||||| |||| || || || |||||  |||| |||| | ||
Sbjct: 579 actaacttatttaacccattcaaactattctaagtcttctacatggttagatacctctct 638

                                                                       
Query: 410 tt-atc-tatttacttagcatcttcctaaatatctcccttagcatatgtgccagcatctg 467
           || ||| | ||  |||||||||||||| || |||||||||||||| ||  ||||||||| 
Sbjct: 639 ttcatcctcttc-cttagcatcttcctcaacatctcccttagcatctgccccagcatctt 697

                                  
Query: 468 tccctgaatctg--tttattctc 488
           |||||||||||   |||||||||
Sbjct: 698 tccctgaatctccttttattctc 720


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 920
Length adjustment: 10
Effective length of query: 511
Effective length of database: 910
Effective search space:   465010
Effective search space used:   465010
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)