Query= MSMg01no396_l24.b1 MSMg01no396_l24.b1 CHROMAT_FILE:
MSMg01no396_l24.b1 PHD_FILE: MSMg01no396_l24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:57 2005
(469 letters)
>mm_chr5_9552528_9553396
Length = 869
Score = 891 bits (461), Expect = 0.0
Identities = 464/465 (99%)
Strand = Plus / Plus
Query: 5 gaattcacattcactctaactatgtttaagaagagcaatttgttcaaaattgttacaaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacattcactctaactatgtttaagaagagcaatttgttcaaaattgttacaaaa 264
Query: 65 tacaaagagaggccagatgtgaaacagtatattcaaatctatagcataaaacatgggact 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tacaaagagaggccagatgtgaaacagtatattcaaatctatagcataaaacatgggact 324
Query: 125 taatagttccaccactcttgcttcagcccttactgtagctgcctcctgtagagctgccca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taatagttccaccactcttgcttcagcccttactgtagctgcctcctgtagagctgccca 384
Query: 185 atgcagccatccagagtatacatctgcaggagagaggctgttgtttgagagtggtttctt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atgcagccatccagagtatacatctgcaggagagaggctgttgtttgagagtggtttctt 444
Query: 245 caacaactttttttgtttcctttccagtgtttgacaaaagaaagatgcttcaataattgt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caacaactttttttgtttcctttccagtgtttgacaaaagaaagatgcttcaataattgt 504
Query: 305 tgaaaaaagtgacatgttgatccatggagctcatagggattttgatgttcctgtcttcaa 364
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 505 tgaaaaaagtgacatgttgatccatggagctcatagggtttttgatgttcctgtcttcaa 564
Query: 365 caatacattattgtggtgatgtacgtaggctaacttgctattcctgctatgagcaagact 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 caatacattattgtggtgatgtacgtaggctaacttgctattcctgctatgagcaagact 624
Query: 425 tgtaagaggtcagggcaacctggatattgcttgaagtcatacaat 469
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgtaagaggtcagggcaacctggatattgcttgaagtcatacaat 669
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 869
Length adjustment: 10
Effective length of query: 459
Effective length of database: 859
Effective search space: 394281
Effective search space used: 394281
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no396_l24.g1 MSMg01no396_l24.g1 CHROMAT_FILE:
MSMg01no396_l24.g1 PHD_FILE: MSMg01no396_l24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:08:58 2005
(428 letters)
>mm_chr5_9589551_9590378
Length = 828
Score = 828 bits (428), Expect = 0.0
Identities = 428/428 (100%)
Strand = Plus / Minus
Query: 1 agtgacgggctcttttagccctatcctcccttatctgaaggacagaccaaagatcctact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 agtgacgggctcttttagccctatcctcccttatctgaaggacagaccaaagatcctact 569
Query: 61 tggaaatgagaggatactagcaggaaacattggacccactcagtgatatctccaagagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 tggaaatgagaggatactagcaggaaacattggacccactcagtgatatctccaagagat 509
Query: 121 acagaaccaggattcatgaagatgttgacaagactacaagttcttatgttagctttgttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 acagaaccaggattcatgaagatgttgacaagactacaagttcttatgttagctttgttt 449
Query: 181 tcaaagggatttttagtctctttaggagatcacaactttatgaggagagaaattaaaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tcaaagggatttttagtctctttaggagatcacaactttatgaggagagaaattaaaata 389
Query: 241 gaaggagaccttgttttagggggcttatttcctattaatgaaaaaggcactggaactgaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 gaaggagaccttgttttagggggcttatttcctattaatgaaaaaggcactggaactgaa 329
Query: 301 gagtgtggacgaatcaatgaagacagaggtatccaacgcctggaggccatgttgtttgcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gagtgtggacgaatcaatgaagacagaggtatccaacgcctggaggccatgttgtttgcc 269
Query: 361 attgatgaaatcaacaaagacaattacttgcttccaggagtgaagctgggggttcacatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 attgatgaaatcaacaaagacaattacttgcttccaggagtgaagctgggggttcacatt 209
Query: 421 ttggatac 428
||||||||
Sbjct: 208 ttggatac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
