Query= MSMg01no397_m01.b1 MSMg01no397_m01.b1 CHROMAT_FILE:
MSMg01no397_m01.b1 PHD_FILE: MSMg01no397_m01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:17 2005
(179 letters)
>mm_chr5_127693746_127694324
Length = 579
Score = 339 bits (175), Expect = 8e-98
Identities = 178/179 (99%)
Strand = Plus / Plus
Query: 1 atccttgcggtttgggggttgttttgttttgttttgtttgtttttgtttttgtttttgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atccttgcggtttgggggttgttttgttttgttttgtttgtttttgtttttgtttttgat 260
Query: 61 tcgcttaccctgtgagaagcataaaagaactcatttcaacttcatttatttcatatctcg 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcacttaccctgtgagaagcataaaagaactcatttcaacttcatttatttcatatctcg 320
Query: 121 gccttgtatttggacaccaatattctctgtattagggaagtttgcttcaacaataaaat 179
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gccttgtatttggacaccaatattctctgtattagggaagtttgcttcaacaataaaat 379
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 179
Length of database: 579
Length adjustment: 8
Effective length of query: 171
Effective length of database: 571
Effective search space: 97641
Effective search space used: 97641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no397_m01.g1 MSMg01no397_m01.g1 CHROMAT_FILE:
MSMg01no397_m01.g1 PHD_FILE: MSMg01no397_m01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:17 2005
(405 letters)
>mm_chr5_127901379_127902184
Length = 806
Score = 754 bits (390), Expect = 0.0
Identities = 402/406 (99%), Gaps = 1/406 (0%)
Strand = Plus / Minus
Query: 1 aattcagagaccagaacacctacaggatgccgccatttctcaaagtcacaaaaggtcgcc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 606 aattcagagaccagaacacctacaggatgccgccatttctcaaagtcacaaaagctcacc 547
Query: 61 tgtgactcccaacaaagatgtcaaggatcgtgcagatagtgcacacactgatggaaacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 tgtgactcccaacaaagatgtcaaggatcgtgcagatagtgcacacactgatggaaacat 487
Query: 121 gagcaac-atggaatgacaggtctgcctataaatatctcctcagacagcagacctgacag 179
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gagcaacaatggaatgacaggtctgcctataaatatctcctcagacagcagacctgacag 427
Query: 180 tagcgcaggtccagaaggtgaagagggttgaataggaacccctgactccatccccatgaa 239
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tatcgcaggtccagaaggtgaagagggttgaataggaacccctgactccatccccatgaa 367
Query: 240 tgatgctttgttccattcctaaaatgaaaccaacacccaaggtgtccatccctgtcacct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tgatgctttgttccattcctaaaatgaaaccaacacccaaggtgtccatccctgtcacct 307
Query: 300 aaatgtgacatcttggtgcatccagagagaggccattttggggggaacttgacatcttgg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 aaatgtgacatcttggtgcatccagagagaggccattttggggggaacttgacatcttgg 247
Query: 360 attctaaccttgaagtgttgcatgctacaaacatgatatatggctg 405
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 attctaaccttgaagtgttgcatgctacaaacatgatatatggctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 806
Length adjustment: 9
Effective length of query: 396
Effective length of database: 797
Effective search space: 315612
Effective search space used: 315612
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
