TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCAGTTAGTATTACCGAACACCACTTAGGAAGTCATATTTTTATATA
AAAACATGAATCGAAGGTTTGTAAATCTTTGTTTGAGAGAGAGCATGATA
TATCTGTTTGCCTTGAGCATACCAAGTACTCTGTTTTGTTCGGTGTGTGT
TTGTTTTGTTTGTTTTTGCAGCAGTGAGCATTGAACTTTGCCTTCAGGGC
AGAAGCTGTGCTCCAGCTTTTATACTCATGATTCTGAAGAGTTTTCCTAA
TTGTAAAATAGTAGCTCAATAGCGTTAGAGGAAAGCATTTGTTCTCTTAT
CTGAAGTGGTAACTAAACAAGTTTCACTAAGCTGTAAGTGGCCACGCATG
AGTGGCAGTAAAGGTAATAGGGTGTTGGAATTTGATTAGAGGAAAACAAA
TATTAAATGAAGTAGTGCCTGCTAGTGTACGCTGCGGATCATTCTCCACA
AGGAGATTTAGTGCTTTAGAGCGTGCTTGGACTCTTCCGACCTGTTACAT
TAACAAAGGTGAGTTAGGTTTCCCCGAGTCGATTCGCACTTAGCCATTTC
TTCCATTAGGATAATTCTGTGAAATAGTCACTCTTTTTCAACTGNAAGTA
CATACGTACCATTTCTTTCTAAGTCACTTTTCCATGTTGTCCCTTCATGC
CACACTTTCTATACTTAGAAACGGACATATCTTCATGCCTACTGTCCCTA
TTTCTGTGTCACACTTAATTG

GACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXAAGGCCCATACATAAACATGATAAAAGC
AATCTACAGCAAACCAGTAGCCAACATCAAAGTAAATGGTGAGAAGCTGG
AAGCATTCCTAATAAAATCAGGGACTAGAAAAGGCTGCCCACTTTCTCCC
TACCTATTCAACATTGTACTTGAAGTCCTAGCTAGAGCAATTCGACAACA
AAAGGAGATCAAGGGGTTACAAATTGGAAAGGAAGAAGTCAAAATATCAC
TTTTTGCAGATGATATGATAGTATATATAAGTGACCCTAAAAATTCCACC
AGAGAACTCCTAAGCCTGATAAACAGCTTCAATCAAGTAGCTGGATATAA
AATTAACTCAAACAAGTCAATGGCCTTTCTGTACACAAAGGATAAACAGT
CTGTGAAAGAAATTAGGGAAACAACACCCTTCTCAATAGTCACAAATGAT
ATAAAATAACTTGGCGTGACTCTAACTAAGGAAGTGAAAGATCTTTATGA
TAAAAACTTTATGGCTCTAAAGAAAGAAAGAAGATCTCAGAAGATGGAAA
GATCTCCCATGCTCATGGATTGACAGGATCAATATAGTAAAAATGGCTAT
TTTGCCAAAAGCAATCTACAGATTCCATGTAATCCCCATCAAAATTCCAA
CTCAATTCTTCCACAAATTGGAAATGGAAATCTCCACATTCTTCTGGAAT
TACCAATAACCTAGGATAGCCAAAACTCTTT

Query= MSMg01no400_c01.b1 MSMg01no400_c01.b1 CHROMAT_FILE:
MSMg01no400_c01.b1 PHD_FILE: MSMg01no400_c01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:19 2005
         (538 letters)



>mm_chr5_63013978_63014915
          Length = 938

 Score =  971 bits (502), Expect = 0.0
 Identities = 526/534 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcagttagtattaccgaacaccacttaggaagtcatatttttatataaaaacatga 64
           |||||||||||||||||  ||||||||||||||| |||||||||||||||||||||||||
Sbjct: 738 gaattcagttagtattaaggaacaccacttaggaggtcatatttttatataaaaacatga 679

                                                                       
Query: 65  atcgaaggtttgtaaatctttgtttgagagagagcatgatatatctgtttgccttgagca 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 atcgaaggtttgtaaatctttgtttgagagagagcatgatatatctgtttgccttgagca 619

                                                                       
Query: 125 taccaagtactctgttttgttcggtgtgtgtttgttttgtttgtttttgcagcagtgagc 184
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 taccgagtactctgttttgttcggtgtgtgtttgttttgtttgtttttgcagcagtgagc 559

                                                                       
Query: 185 attgaactttgccttcagggcagaagctgtgctccagcttttatactcatgattctgaag 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 attgaactttgccttcagggcagaagctgtgctccagcttttatactcatgattctgaag 499

                                                                       
Query: 245 agttttcctaattgtaaaatagtagctcaatagcgttagaggaaagcatttgttctctta 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 agttttcctaattgtaaaatagtagctcaatagcgttagaggaaagcatttgttctctta 439

                                                                       
Query: 305 tctgaagtggtaactaaacaagtttcactaagctgtaagtggccacgcatgagtggcagt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tctgaagtggtaactaaacaagtttcactaagctgtaagtggccacgcatgagtggcagt 379

                                                                       
Query: 365 aaaggtaatagggtgttggaatttgattagaggaaaacaaatattaaatgaagtagtgcc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aaaggtaatagggtgttggaatttgattagaggaaaacaaatattaaatgaagtagtgcc 319

                                                                       
Query: 425 tgctagtgtacgctgcggatcattctccacaaggagatttagtgctttagagcgtgcttg 484
           || |||||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 318 tgttagtgtacactgtggatcattctctacaaggagatttagtgctttagagcgtgcttg 259

                                                                 
Query: 485 gactcttccgacctgttacattaacaaaggtgagttaggtttccccgagtcgat 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gactcttccgacctgttacattaacaaaggtgagttaggtttccccgagtcgat 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 938
Length adjustment: 10
Effective length of query: 528
Effective length of database: 928
Effective search space:   489984
Effective search space used:   489984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)