Query= MSMg01no400_e07.b1 MSMg01no400_e07.b1 CHROMAT_FILE:
MSMg01no400_e07.b1 PHD_FILE: MSMg01no400_e07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:31 2005
(212 letters)
>mm_chr5_81566898_81567509
Length = 612
Score = 277 bits (143), Expect = 4e-79
Identities = 146/147 (99%)
Strand = Plus / Minus
Query: 1 aagtttatttttataatatgcctagtatatttagggacactttatgtatcgggtccaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 aagtttatttttataatatgcctagtatatttagggacactttatgtatcgggtccaaaa 274
Query: 61 gcacttggaatgaaattagattcagttatagtcctatgaagtggggcaagatgtagaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gcacttggaatgaaattagattcagttatagtcctatgaagtggggcaagatgtagaagc 214
Query: 121 aaatgaaaatttcatatatatatatat 147
|||||| ||||||||||||||||||||
Sbjct: 213 aaatgagaatttcatatatatatatat 187
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 63
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 212
Length of database: 612
Length adjustment: 9
Effective length of query: 203
Effective length of database: 603
Effective search space: 122409
Effective search space used: 122409
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no400_e07.g1 MSMg01no400_e07.g1 CHROMAT_FILE:
MSMg01no400_e07.g1 PHD_FILE: MSMg01no400_e07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:31 2005
(538 letters)
>mm_chr5_81342806_81343744
Length = 939
Score = 988 bits (511), Expect = 0.0
Identities = 532/539 (98%), Gaps = 1/539 (0%)
Strand = Plus / Plus
Query: 1 tagaaattataggaagaaactaatcatatgaataattgagacctaaacataaaaaa-tct 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 tagaaattataggaagaaactaatcatatgaataattgagacctaaacataaaaaaatct 260
Query: 60 taaagaaaaattaagactttatcttttaactttattgttgaaatactaataaaagaagtg 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaagaaaaattaagactttatcttttaactttattgttgaaatactaataaaagaagtg 320
Query: 120 aaatattttcatgtcaactgaaatttaatttgtaattttctggcttaactatgtactggg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatattttcatgtcaactgaaatttaatttgtaattttctggcttaactatgtactggg 380
Query: 180 aatgaacatcagaaaatcttgaaacaaagggcttttatgttagtcactgctcactggctg 239
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 aatgaacatcagaaaatcttgaaacaaagggcttttatgtcagtcactgctcactggctg 440
Query: 240 gttccagctcagttctgtctgcataaatatattcttactcttgaaacagtcttgttctct 299
||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 gttccagctcacttctgtctgcatagatatattcttactcttgaaacagtcttgttctct 500
Query: 300 tatcaggctgaaggcacagttcaggcactgaacgctacttaaaatctatttacagaaggg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatcaggctgaaggcacagttcaggcactgaacgctacttaaaatctatttacagaaggg 560
Query: 360 aaagcatcaagaagttcagtgttaaaagcttccaggttttaatcaagctcttttaactcc 419
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaagcatcaagaagttcaatgttaaaagcttccaggttttaatcaagctcttttaactcc 620
Query: 420 taaaatcacagggtcaaaactgatcaaatggtcaaaatatgtactcaattaatgagatat 479
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taaaatcacagagtcaaaactgatcaaatggtcaaaatatgtactcaattaatgagatat 680
Query: 480 acagtaagtgaaatggaatgacacaggagtgagcaggaagggactcacagcattatctt 538
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acagtaagtgacatggaatgacacaggagtgagcaggaagggactcacagcattatctt 739
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 538
Length of database: 939
Length adjustment: 10
Effective length of query: 528
Effective length of database: 929
Effective search space: 490512
Effective search space used: 490512
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|