AAAATTTGCGGCGCTAAACGACGCCTAATTCCAAAACACCGCGGAATTCT
TTGTTTTGCCATGAACCCATATTTTAATGGGATTATTTGGTTTTCTGGAG
TCCATCTTCTTGAGTTCTTATATATATTGGATATTAGTCCCCTATCTGAA
TTAGAATTGGTAAAGATCCTTCCCAAATCTATTGGTGGCCTTTGTGTCTT
TATGACAGTGTCTTTTGCCTTACAGAAGCTTGGCAATTTTATGAGGCCCT
ATTTGTCAACTCTCAATCTTACAACACAAGCAAATGCTGTTCTTTTTTTT
TAAATTAGGNATTTTCTTCTTTATTTTTCCAATGCTATCCCAAAAGTCTC
CCATATCTCCCCCCCCCCGACTCCCCTAGGCACACACATCCTCTTCTTGG
CCCTGGCACCCCCCTGCACTGAGGCATATAAAGTTTGCAAGACCAACAGG
CCTCTCTTTCCCAAGATGGCCGACTAGGCCATCCTCTGATACTTATGCAG
CTAGGTACCTTGCCTCTGGTGTTAACTGGCTACCTCCTATTGTTCGTGAA
CCACCATGCTGCACAATTCTTTACCCCCCTTGCATTTTTTTCCTAGTTTT
TTCTTTGTTGCCCCTGTGGTCTTTTTCGTATACGCCCCGTGGCGATCTCC
TCCCTCTCTTCTTTTTTTTCTCCTCCCCCCTCCTTTTTTACTATACTCAT
CTTCTCCCCTTCCCCCCTCGCTCTTCCCCTCTGCCTATATATTCTTTTCT
CTACTTTCTCCTTCCGTTTCTTGTTCTTCCCTGTTTCGCGCGCAC

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCAGGACAGCCAGGGCTACGCAGAGAAACC
ATGTCTCGAAAAACTAAAAACAAAACAAAACAAAACAACAACAACAAAAA
GAACCCAACACAGAATACAAAATAGGAATGACAGTTAAAACTTACCTATC
AAAATATCTATAGCATTTTAATCACTTGTCGTTTCATTTACTAAGAGCTC
AAATTCTTGCCCCGTGTGAGTTATTCAAATCCACATACTCTAAACTTCAT
AATGAGAATATTGGGTCCTTGCTTCTTATTTTTATTGATCTACATTTTGA
CAGAGATTCAGTAGTTCCTTAGATTCACTCTACAGTCTAAAATGCAATCT
CATATCTAANAACATTGCATGCTTGAATCCTATCAGTAACTTTGTTATTG
AATTGATTGAGACTTGTTGTTTATCTGTAATTCTTACTATTCTGTCAAAG
TTATGAATTACCGCCCATGCTTTGGNTAGTCTTTCTAGGAAAAAGCCACC
TCCAATGTGGGAAACAGTATCTAACCCTCCTTATGGGGTGGGGAAAACCC
GATAAACCCTGGCTTAAAAAAAATCCCTAAAAATCCTCAAAGCGGAAAAC
CGGGTGAATTGAAAGAAAACCCTGTTCTCCCCCAAAGGGAGGAACCCCCC
TTGGCCCCCCCCTTGGTACCCGGAAAAAAAAAAGGGGGTGCCTTTCCCAT

Query= MSMg01no400_n14.g1 MSMg01no400_n14.g1 CHROMAT_FILE:
MSMg01no400_n14.g1 PHD_FILE: MSMg01no400_n14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:17 2005
         (423 letters)



>mm_chr5_84605039_84605861
          Length = 823

 Score =  789 bits (408), Expect = 0.0
 Identities = 419/423 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   caggacagccagggctacgcagagaaaccatgtctcgaaaaactaaaaacaaaacaaaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 caggacagccagggctacgcagagaaaccatgtctcgaaaaactaaaaacaaaacaaaac 637

                                                                       
Query: 61  aaaacaacaacaacaaaaagaacccaacacagaatacaaaataggaatgacagttaaaac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 aaaacaacaacaacaaaaagaacccaacacagaatacaaaataggaatgacagttaaaac 577

                                                                       
Query: 121 ttacctatcaaaatatctatagcattttaatcacttgtcgtttcatttactaagagctca 180
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 576 ttacctatcaaaatatctatagcattttaatcacttgtcctttcatttactaagagctca 517

                                                                       
Query: 181 aattcttgccccgtgtgagttattcaaatccacatactctaaacttcataatgagaatat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 aattcttgccccgtgtgagttattcaaatccacatactctaaacttcataatgagaatat 457

                                                                       
Query: 241 tgggtccttgcttcttatttttattgatctacattttgacagagattcagtagttcctta 300
           ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tgggtccttgcttcagatttttattgatctacattttgacagagattcagtagttcctta 397

                                                                       
Query: 301 gattcactctacagtctaaaatgcaatctcatatctaanaacattgcatgcttgaatcct 360
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 396 gattcactctacagtctaaaatgcaatctcatatctaaaaacattgcatgcttgaatcct 337

                                                                       
Query: 361 atcagtaactttgttattgaattgattgagacttgttgtttatctgtaattcttactatt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 atcagtaactttgttattgaattgattgagacttgttgtttatctgtaattcttactatt 277

              
Query: 421 ctg 423
           |||
Sbjct: 276 ctg 274


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space:   336996
Effective search space used:   336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)