TTCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGCAAATCCGCG
GAATTCCAACTCTATACCAAAAAAACAGGAGGCAACAATGACTTTTCCTT
AATATCTCTTAATATCAATGGACTCAATTCCCCAATAAAAAAATATAGAC
TAACAGACTGGTTACATAAACAATACCCAACATTTTGCTGCACACAGGAA
ACCCACCTCTGGGACAAAGACATACACTACCTTAACTAAATTCCACTAAA
ATCAGGGACTAGAAAAGGCTGCCCACTCTCTCCCTACCTATTCAATATAG
TACCTGAAGTCATAACCAGAGTATTTATACAACAAAAGGAGGTCAAAAGA
ATACAAAATGGAAAGGAAGAAGTCAAGAAGGCTGGAAAACAATATTCCAA
GCAAATGGTCCCAATAAATAAGCTGGAGTAGCCATTTTAATATCAAATAA
AATTGACTTTCTATCATTATTATTATTATTATTTGGTTTTTTGAGACAGG
GTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGCCCAAGC
TGTCCTTGAACTCAGAAATCCACCTCCCTCTGGCTCCCAAGTGCTGGGAT
TTAAAAGTGTGTGCCATCACACCTGGCACATAAAAATGAATTTTCCACCC
AAGATCCCCAAAAAAAATAAGGAGGGGACAATTCTTACCTCTCCCAGGGG
AAATTTTACCACGAAGAAATCCTCCATTTTTGAAAATTAATTGTTCCAAA
GCAAGGGGGTCCCTCTTTCTTTAAAGAAAATTTGGCTCCAATTCCTAACN

CCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTGGGGTGACATAAACTAGATAAAGGG
CCTTTCTTGGAGAACTAGGCTTAAGGAATATCCCTGTCTTCTGTCTTTTG
GTTTTCGTTTGTTCGTCTTTTATTTTCTTGTGGCATTATTAGGCAGGTAA
GCTTGATGTAGACCATTGACTGACCCCAGTCAAAGATAGGTCCTAGTGAT
ATAAGAACACTAGCCCAAAAGGTCTATGCAGTAGTTAAGTAGTGCTTTTG
CTTATTATAGGGTGCTCTGTTGTTTTTCTCTGTGTCCTCTGACCCAAGAC
AAAATGCACAAGTCAGGAAGCACTTTCTTGTGCCCGAGCTGTGGGCCACC
CTGGGGGCGCTGTCGCTGCTGTTTCCCTGCCCGAGAATCAGCTTGAATTC
CCACTCCTGCTTGTTGGCCCCAGCTCTGGCTTTGCATCCTTACTCTCATG
CCCAGTTGCTTAGAGAGAACGGGAGAACAGGTCTAAGGAATTGTACCTTG
ATGTGCTCTGCAAAGGAGATAACGAATGGGGCGCAAGGTATAAAAGAACA
AGACCCCTCCCCACAGAGGAAACCACTAGGGAGCTTAACTCACTTATTGG
GAGAACCTTTAAACCTTTTCCCAATTCCGCAAGGAACGTTGGTGTTTTTT
TAATTTTTTGAAGAAATATTCCTTTTTTATTCCTTAAAAAAAAATTTGGG
AAGGTGCTTTTTCCTCCCTTTGTTTTTATCCCAATCA

Query= MSMg01no401_e21.g1 MSMg01no401_e21.g1 CHROMAT_FILE:
MSMg01no401_e21.g1 PHD_FILE: MSMg01no401_e21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:14:54 2005
         (459 letters)



>mm_chr5_28743139_28743997
          Length = 859

 Score =  841 bits (435), Expect = 0.0
 Identities = 453/459 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttggggtgacataaactagataaagggcctttcttggagaactaggcttaaggaatatcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttggggtgacataaactagataaagggcctttcttggagaactaggcttaaggaatatcc 260

                                                                       
Query: 61  ctgtcttctgtcttttggttttcgtttgttcgtcttttattttcttgtggcattattagg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgtcttctgtcttttggttttcgtttgttcgtcttttattttcttgtggcattattagg 320

                                                                       
Query: 121 caggtaagcttgatgtagaccattgactgaccccagtcaaagataggtcctagtgatata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caggtaagcttgatgtagaccattgactgaccccagtcaaagataggtcctagtgatata 380

                                                                       
Query: 181 agaacactagcccaaaaggtctatgcagtagttaagtagtgcttttgcttattatagggt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agaacactagcccaaaaggtctatgcagtagttaagtagtgcttttgcttattatagggt 440

                                                                       
Query: 241 gctctgttgtttttctctgtgtcctctgacccaagacaaaatgcacaagtcaggaagcac 300
           ||||||  | | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctctgagggtcttctctgtgtcctctgacccaagacaaaatgcacaagtcaggaagcac 500

                                                                       
Query: 301 tttcttgtgcccgagctgtgggccaccctgggggcgctgtcgctgctgtttccctgcccg 360
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttccttgtgcccgagctgtgggccaccctgggggcgctgtcgctgctgtttccctgcccg 560

                                                                       
Query: 361 agaatcagcttgaattcccactcctgcttgttggccccagctctggctttgcatccttac 420
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 561 agaatcagcttgaattcccacttctgcttgttggccccagctctggctttgcatccttac 620

                                                  
Query: 421 tctcatgcccagttgcttagagagaacgggagaacaggt 459
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tctcatgcccagttgcttagagagaacgggagaacaggt 659


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space:   381201
Effective search space used:   381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)