CATTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCAGAGTACCTAAAACAGACATATGGCTATAGACTAATGATAGATT
TGGCCATTTGTACTAGCATCATTTCTTAAGTCTGACATTTTTAACTGGCC
AGCTTCCATTCCTTATCATTAAATCAGTGCCAAGCAAATCCATGCCATAA
GGAAAACTTTATATGGTCGTACCAAGATTTAAAAGGCTAAAGTTTTATAA
TATGCTTTATCTTATGAGAAAGGTGAATATGAGTGAGTGAGACAGGGACT
CTAGGAGGAGTGGGCATCTTTTTAGACGGTGGGGAGCAATGAGTGTGTAC
CTGATGTGATACTGAGCCCAGTCAGATAGGTGAGGAGCAGTGGATACACA
AGGCACTAGAGCACGAAGCAGGAACTTCCTTTGTGGAGCCTGCTTTAGCC
TCCAGGCCCCTCCTAATCCTGATGTGCACTCCAGATGTTGACACCTGGAC
CAGAGAGTTATGTGATTTCAATATGGCTTTGTCCCTAAGGATTCACACAT
ACTGAATACTCGGCCCCCAGTGAAGTGACTAGAGACTGACCCCTAACAAA
ACCTCTTATCCATACAAAGTAACCACGCCCTCATGCCTTTTTAAAAGTCT
TTTATCAAATTGACTATGTCTCTACTCCCATCTCAGTGGGGCCTAAAACT
TGTTGGGGCATGTTAATGACCGGACTTATAATAAAATGGCTTTCGAAAGG
CCCCCTGTTCCGGAC

CAATAATTGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCGAATAAAGATTCATAAGTTTTAAGTAATTT
TATTATAATATATTGTTTTAAGTGTTTTTATCAGTTGTAGTTACTCTCTC
ACTATGTCTAATTTAGAAAAGTATCATAGATGTGTATATATAGTGAAAAA
GGCATAGATAAGGTTCAGTATTATTTGTGGTTTCTTCTAGGAGTCTTTGA
ATGTAAGTCTCATGAATAATAAAGGACTCAATGTGCAGGACCTTAACAAT
CAACAGGAACGTTTTTCTTTTGAGTAAATAACTAGTGGTATCTTACTTAC
ATTTTTATTTCTGTGATAACATTCCCTGATTAAAAGTTAGTTAGGAAAGA
TATGGGTTCCTTGCTTGACTGTTCTAGAATTGATATACTCCTATTGTGAA
CAACGCCTGTCTTATCATGAGCATGTTACTGGCCCGGATCTGCCTTATCA
TGTTTTATATTCCCCCATTATTCTCTTATCGAATTACACCCTTCCCTGCG
TCCCTGTTTGTATTTTCCTGTACATTACCTTTTTCCCTCCTGTGATGGTT
CCCCTTTCCGTCTATCCCCTTCTTCCCTTCCTTCTCTTTATTTTTCCCCC
CCCCCCTATTTTTCTTTCGCCCCCACTCCATGTCCTTTTTTTTCCTACCT
TTATTCCCCTCCTGTGACCCCCCCTTCTCACTCTCCTTTCCTTTTCCACC
CN

Query= MSMg01no403_d07.b1 MSMg01no403_d07.b1 CHROMAT_FILE:
MSMg01no403_d07.b1 PHD_FILE: MSMg01no403_d07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:24 2005
         (465 letters)



>mm_chr5_68162352_68163216
          Length = 865

 Score =  845 bits (437), Expect = 0.0
 Identities = 458/465 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   atatggctatagactaatgatagatttggccatttgtactagcatcatttcttaagtctg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 atatggctatagactaatgatagatttggccatttgtactagcatcatttcttaagtctg 606

                                                                       
Query: 61  acatttttaactggccagcttccattccttatcattaaatcagtgccaagcaaatccatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 acatttttaactggccagcttccattccttatcattaaatcagtgccaagcaaatccatg 546

                                                                       
Query: 121 ccataaggaaaactttatatggtcgtaccaagatttaaaaggctaaagttttataatatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ccataaggaaaactttatatggtcgtaccaagatttaaaaggctaaagttttataatatg 486

                                                                       
Query: 181 ctttatcttatgagaaaggtgaatatgagtgagtgagacagggactctaggaggagtggg 240
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 485 ctttatcttatgagaaaggtgaatatgagtgagggagacagggactctaggaggagtggg 426

                                                                       
Query: 241 catctttttagacggtggggagcaatgagtgtgtacctgatgtgatactgagcccagtca 300
           |||| |   |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 catcgtgggagacggtggggagcaatgagtgtgtacctgatgtgatactgagcccagtca 366

                                                                       
Query: 301 gataggtgaggagcagtggatacacaaggcactagagcacgaagcaggaacttcctttgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gataggtgaggagcagtggatacacaaggcactagagcacgaagcaggaacttcctttgt 306

                                                                       
Query: 361 ggagcctgctttagcctccaggcccctcctaatcctgatgtgcactccagatgttgacac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ggagcctgctttagcctccaggcccctcctaatcctgatgtgcactccagatgttgacac 246

                                                        
Query: 421 ctggaccagagagttatgtgatttcaatatggctttgtccctaag 465
           |||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 245 ctggacaagagagttatgtgatttcaatatggttttgtccctaag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space:   389025
Effective search space used:   389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)