TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTCTGTGTTTCATTAAGCTCTCAGACTAAGGATTATTGTGTCTGTGTTCA
CGGGTGTTGACTATATTACTATGACTCTTGTTACTGTGTCCATGTGACCT
CAGTATCTGCGTAATACATTCTCTAAGGATGAATCTTGATTGCTCCTGCT
CTTCTTTCTAGTTTAATAGTTTCAGAAGTACTGGTGTGGGCTCTTCTTTA
AAGATTTGATGAAAATCACCAATGAGTTTGTCTGGTCTGGCCTTTTCTTG
TTTTTATTGTTAAGAAATTCTTTTAAATTACTATTTAAATCTTGTTGCAT
TTTTGTTTGAAATTAGATTTTTGAGATTTTATTTGTTTGTTTGTTTTCGA
GACAGGGTTTCTCTGTATCACCCTAGCTGTCCTGGAACTCACTTTGTAGA
CCAGGCTGGCCTCGAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGC
TGGGATTAAAGGCGTGCACTACCATGCCCCGTAATTTTTGAGAATTTTAC
ATGATATTTTGGTTGTATTTTTCCTTTCCCCTAACTCCTCCCAGATCCTC
CATTCGGCATTTCCTACTATCCTGGTGTGGGTCTTTTGTTTTGTGTCTGG
CCATCAAGTACAGTTTCTCTTGCCTTTATACTCTCCGGTATGTGGCCTTC
CATTGAAGAGTAGTCTGTCCAGTCTTATCCGTGAGGGGCCATATCCTT

AAAATTAACGCACACCACCTTGTTTGGGTTTCCCCCATTTTTTTACTAAA
AAAATCAAACCCATCCCTCCCCTGTACTTTACGCCTAATACAAAACNCCC
CACAGAAACAACAACCCCATTACTTTCAAATATCCTCCTCTTTTCTTTAC
CCCCCTTAATCAAAAACCAAAACACCCATTAAATAATACATTACACAACC
CCCTCTCTTTAATTCATACTTTAACTATTTAGAACCACCCAAATACACCA
AACCCCATCTTATCACTCTATTCATATACAATCACACAAAAAAAAAATCT
ATGATGATTACTAACAAGCTAAGCACACGAAATACGATCACCTGCTTCCG
TCATCCCCTAAATCTCCCCTTCCTGTCCCGCAAAATCTGTTACAAAACCG
TATACAACCTTACAAAAAGTAGATAATACCAATGGGAGGGGGGGGAACAC
AAACCAACTAGTATCACCCTCATAACCCATCACAATACAGCCAAATACCC
GACCCCCCTCCTACCCCTTCCTTTTTTACCACCATTTTTAAACACATCTA
TAACCCCATACCAACACTTACCCCAAACAATGCCACTTGCTCACCCATAT
AACCAGGTCCACAATTATTTCGCACAACATACCACTTAAACTCCCCCCCC
AAAAAATAAACCCTCCTTCCCCAGATTGCGGNNNNNNNGGGGGTATCTGT
TNAANNNNNNNGGCANNATGNCATNGNTCGGNTTTAGGATCNGTAAGGGC
GGNNGGGCCCNGGTTGNCGCGGTAGNCCATNNATTGANNAGGNTGGNNAC
CNATTNNAGNNNNGANAGCTTGNNNGCNACGNANNAGGGTTTANNNNGAN
NACTNGCNGTNAGTNNGNNNTTTGNGNNANTNNGANNANTCGGAGTTTNG
ACCNTTGNNAG

Query= MSMg01no403_i03.b1 MSMg01no403_i03.b1 CHROMAT_FILE:
MSMg01no403_i03.b1 PHD_FILE: MSMg01no403_i03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:49 2005
         (647 letters)



>mm_chr5_5796213_5797259
          Length = 1047

 Score =  905 bits (468), Expect = 0.0
 Identities = 597/656 (91%), Gaps = 36/656 (5%)
 Strand = Plus / Plus

                                                                       
Query: 20  cattaagctctcagactaaggattattgtgtctgtgttcacgggtgttgactatattact 79
           ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 194 cattaagctctcagactaaggattattgtgtctgtgttcactggtgttgactatgttact 253

                                                                       
Query: 80  atgactcttgttactgtgtccatgtgacctcagtatctgcgtaatacattctctaaggat 139
           |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 254 atgactcttgttactgtgcccatgtggcctcagtatctgcgtaatacattctctaaggat 313

                                                                       
Query: 140 gaatcttgattgctcctgctcttctttctagtttaata----gtttcagaagtactggtg 195
           ||||||||||||||||||||| ||||||||||||||||    |||||| |||||||||||
Sbjct: 314 gaatcttgattgctcctgctcctctttctagtttaataaatagtttcaaaagtactggtg 373

                                                                       
Query: 196 tgggctcttctttaaagatttgatgaaaatcaccaatgagtttgtctggtctggcctttt 255
           |||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 374 tgggctcttctttaaagatttgatgaaaatcaccaacgagtttgtctggtctggtctttt 433

                                                                       
Query: 256 cttgtttttattgtt---aagaaattcttttaaattactatttaaatcttgttgcatttt 312
           |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 cttgtttttattgttgttaagaaattcttttaaattactatttaaatcttgttgcatttt 493

                                                                       
Query: 313 tgtttgaaattagatttttgagattt-t---att---------------tgtttgtttgt 353
           |||||||||||||||||||||||||| |   |||               |||||||||||
Sbjct: 494 tgtttgaaattagatttttgagatttgtttgattgattcattgtttgtttgtttgtttgt 553

                                                                       
Query: 354 tttcgagacagggtttctctgtatca-ccctagctgtcctggaactcactttgtagacca 412
           |||| |||||||||||||||||| || |||| ||||||||||||||||||||||||||||
Sbjct: 554 tttcaagacagggtttctctgta-cagccctggctgtcctggaactcactttgtagacca 612

                                                                       
Query: 413 ggctggcctcgaactcagaaatccacctgcctctgcctcccgagtgctgggattaaaggc 472
           ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 ggctggccttgaacacagaaatccacctgcctctgcctcccgagtgctgggattaaaggc 672

                                                                       
Query: 473 --gtgcactaccatgcccc--gtaatttttgagaattttacatgatattttggttgtatt 528
             |||| | ||||  | ||  || ||||||||||||||||||||||||||||||||||||
Sbjct: 673 atgtgc-c-acca--cacctggtgatttttgagaattttacatgatattttggttgtatt 728

                                                                       
Query: 529 tttcctttcccctaactcctcccagatcctccattcggcatttcctactatcctggtgtg 588
           | ||||||||||||||||||||||||||||||  ||| ||||||||||| ||||||| ||
Sbjct: 729 tatcctttcccctaactcctcccagatcctccgctcgtcatttcctactctcctggtttg 788

                                                                   
Query: 589 ggtcttttgttttgtgtctggccatcaagtacagtttctcttgcctttatactctc 644
           |||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||
Sbjct: 789 ggtcttttgttttgtgtctggccatccagtacactttctcttgtctttatactctc 844


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space:   660569
Effective search space used:   660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)