Query= MSMg01no403_k09.b1 MSMg01no403_k09.b1 CHROMAT_FILE:
MSMg01no403_k09.b1 PHD_FILE: MSMg01no403_k09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:01 2005
(212 letters)
>mm_chr5_108423248_108423859
Length = 612
Score = 364 bits (188), Expect = e-105
Identities = 191/192 (99%), Gaps = 1/192 (0%)
Strand = Plus / Plus
Query: 1 cacaacataaacttaggtaagttatccaacttctcgctcctgggaactattttcaactca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacaacataaacttaggtaagttatccaacttctcgctcctgggaactattttcaactca 260
Query: 61 tagttccagtctgtgacctagggtcaagccatccttcctctggtctcatcttgatgaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagttccagtctgtgacctagggtcaagccatccttcctctggtctcatcttgatgaagt 320
Query: 121 tctaaatgtcaattgcccccatgaacctctattctaatagggttgggttttgttggtttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctaaatgtcaattgcccccatgaacctctattctaatagggttgggttttgttggtttt 380
Query: 181 tttttgtttttg 192
||||| ||||||
Sbjct: 381 ttttt-tttttg 391
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 212
Length of database: 612
Length adjustment: 9
Effective length of query: 203
Effective length of database: 603
Effective search space: 122409
Effective search space used: 122409
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no403_k09.g1 MSMg01no403_k09.g1 CHROMAT_FILE:
MSMg01no403_k09.g1 PHD_FILE: MSMg01no403_k09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:01 2005
(218 letters)
>mm_chr5_108600911_108601528
Length = 618
Score = 356 bits (184), Expect = e-103
Identities = 190/192 (98%), Gaps = 1/192 (0%)
Strand = Plus / Minus
Query: 1 atgagttataccaactgaagaaaaactgctagaatctcagaaatctagagattaacatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 atgagttataccaactgaagaaaaactgctagaatctcagaaatctagagattaacatat 285
Query: 61 ttctgaggaggctctgatgttaggtaaaatttgaaatcctctatttaaactcttccaatc 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 284 ttctgaggaggctctgatgttaggtaaaatttgaaatcctctattaaaactcttccaatc 225
Query: 121 acaatctaagacctacaaccatgaattattatattattattattattattattattatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 acaatctaagacctacaaccatgaattattatattattattattattattattattatta 165
Query: 181 ttattattatta 192
|||||| |||||
Sbjct: 164 ttatta-tatta 154
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 13
Number of HSP's successfully gapped: 1
Length of query: 218
Length of database: 618
Length adjustment: 9
Effective length of query: 209
Effective length of database: 609
Effective search space: 127281
Effective search space used: 127281
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
