ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTCACCTTACGAATACCGAATGGCAGAGAAGCACTTGAAAAAATGTTC
AACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCC
ACCTCACACCAGTCAGAATGTCTAAGATCAAAAATTCAGGTGACAGCAGA
TGCTGGTGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGA
GTGCAGGCTTGTACAACTACTCTGGAAATCAGTCTGGCGGTTCCTCAGAA
AACTGGACATAGTACTACAGGAGGATCCAGCAATACCTCTCCTGGGCATA
TATCCAGAAGATGCCCCAACAGGTAAGAAGGACACATGCTCCACTATGTT
CATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCTAGATGCC
CCTCAACAGAGGAATGGATACAGAAAATGTGGCACATCTACATAATGGAG
TACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAATG
GATGGACCTGGAGGGCTTCATCCTGAGCGATGAAATACATTCCCCAACAA
AATCCACCATATGGATTCCTTGATAACGGGATATTAATCCCCCACCTATG
ATTACCCCAGAATAATTAAAAATTTTGTTTAACACCCGACTCTTTCTAAT
AATTGATCACTTTTTTGTGCGCTCTTTTGCCTCTCTTCTTAATTTGGCAC
CAAACAACCCTTGG

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXATTGATTAAAAAATACACTTGAAAAACTCA
GTGTTCAATAATCCTTGTGACATCATGAGGAAACTAAAGAAACACAATCT
AATTGATGGCAGGCTAACTTTTCTGATTTGCTGCAAAGCCTTCGTCCATA
TTTATGTCACTCTCATCTCCGTGCCTGGTTTATTTATTTAGCATTGATAT
ATGTGAGATATAAATCAATATTAAAAGTGTTATGGCTGTGCATATCTGCT
TTCACTATGATTAATTTTTCAAAGGGAAAAAAATTAGCAGAAGCTAAAAT
ACTTCAAAAAGTGCAGTCAGAATGCAAAACTAGCTTTTACATGATTAACC
AACTACAGGGAAATAGCATTTTTGAACTATAGATATTTTTGCTTAATGTG
ACACCTAACTAAGCTTTCTTTAAGTAAAATTTTCTAAAAGATGGAACAGG
TATTCCAATTCATTTGTAAATTGCAGAGCTTTGTACATTCAAAGGAAAGA
TGATACCTAGTTCATTACAGCTTCAATTTTACATGTTTTTGCTCTTAACT
AAAAAAGATTTTATTCCGGTTAATGGCCTTTAACCAGAATATGAACCCCT
TCTTAACTGGCCCTCGCTCCACAAGCTTAAACTGGCCCTCAACAGGTCCC
CCTTCCCAAATAAACATAAACACTTGCCCCTAAAAACCCTCGTCCACATG
GAAGGCTGGG

Query= MSMg01no403_p14.g1 MSMg01no403_p14.g1 CHROMAT_FILE:
MSMg01no403_p14.g1 PHD_FILE: MSMg01no403_p14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:18:28 2005
         (485 letters)



>mm_chr5_56208050_56208935
          Length = 886

 Score =  901 bits (466), Expect = 0.0
 Identities = 481/486 (98%), Gaps = 1/486 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   attgattaaaaaatacacttgaaaaactcagtgttcaataatccttgtgacatcatgagg 60
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 686 attgattaaaaaatacacttgaaaaactcagtgtttaataatccttgtgacatcatgagg 627

                                                                       
Query: 61  aaactaaagaaacacaatctaattgatggcaggctaacttttctgatttgctgcaaagcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 aaactaaagaaacacaatctaattgatggcaggctaacttttctgatttgctgcaaagcc 567

                                                                       
Query: 121 ttcgtccatatttatgtcactctcatctccgtgcctggtttatttatttagcattgatat 180
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 566 ttcgtccatatttatgtcactctcatctctgtgcctggtttatttatttagcattgatat 507

                                                                       
Query: 181 atgtgagatataaatcaatattaaaagtgttatggctgtgcatatctgctttcactatga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 atgtgagatataaatcaatattaaaagtgttatggctgtgcatatctgctttcactatga 447

                                                                       
Query: 241 ttaatttttcaaagggaaaaaaa-ttagcagaagctaaaatacttcaaaaagtgcagtca 299
           |||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 446 ttaatttttcgaagggaaaaaaaattagcagaagctaaaatacttcaaaaagtgcagtca 387

                                                                       
Query: 300 gaatgcaaaactagcttttacatgattaaccaactacagggaaatagcatttttgaacta 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gaatgcaaaactagcttttacatgattaaccaactacagggaaatagcatttttgaacta 327

                                                                       
Query: 360 tagatatttttgcttaatgtgacacctaactaagctttctttaagtaaaattttctaaaa 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tagatatttttgcttaatgtgacacctaactaagctttctttaagtaaaattttctaaaa 267

                                                                       
Query: 420 gatggaacaggtattccaattcatttgtaaattgcagagctttgtacattcaaaggaaag 479
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 266 gatggaacaggtattccaattcatttgtaaattggagagctttgtacattcaaaggaaag 207

                 
Query: 480 atgata 485
           ||||||
Sbjct: 206 atgata 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 886
Length adjustment: 10
Effective length of query: 475
Effective length of database: 876
Effective search space:   416100
Effective search space used:   416100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)