CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGATCCGCGGAAT
TCTTTGTTTATCTCTGAGCCCTATTTTTTTAATGGGGTTATTTGATTTTC
TGGAGTCCACCTTCTTGAGTTCCATATAAATACATTAATATATATATGTA
TTATATGTATTTACATATAAATTATATACATATAAACACATATATATATA
TAAACACACACACACACACACACACACACACACACACACACACACACACA
CACACACACACACATATATATATGATATTTGTCCCCTATCTGATTTAGGA
TAGGTAAAGATCCTTTCCCGATCTGTTGGTGGCCTTTTTGACTTATTGAT
GGTGTCTTTTGCCTTGCAGAAGCTTTGCAATTTTATGAGGTCCCATTTGT
CAATTCTCCATCTTACAGCATAAACCATTGCTGTTCTATTCAGGAATTTT
TCCCCTGTACCCATATCTTCAAGACTTTTCTCTACTTTCTCTTCTATAAG
TTTCAGTGTCTCTGGTTTTATGTGGAGCTCCTTAATCCATTTAGATTTGA
CCTTAGTAAAAGGAGATAGGAATGGATCAATTCACATTCTTCTACATGAT
AACCTCCAGTTGTGCCAGCACCATTTTGTTGAAAATGCTGTCTTTTTTCC
ACTGGATGATTTTAGTTCCCTTTGTCAAGAACAAGAGCCCATAGAGGTGT
GGGGTTATTTCCTTGGAATTCCAATCTATTTCCCTGGGCTAATTGGCTGG
TTGCTAAACCAATTACAACGAGATATCTTACAN

GATTGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCAACTTGCTAAATAAATGATACATT
TTGCAAGAAAATAATAAAAGTCATGACATTTCTAACAAGATCTCATAAAT
AATAATAATAAAAAAACAGAATTCATTCCTCACATTGAAACAGTGCAGCT
AAGAAGGAAGTTATATGTGTGGTAAAAACAGTCAATATTTAGACAAAAAG
TATTTTTTCTATTCATGAAGAATATAGAGGAATTAAAGGCCTGACAAAAA
TGTTTTGTGATGCTTTTCTCAGAGTTCTACCCCAGAGCAGACTACAATTG
TTAAATCTTTTCTCTCTTGTCTACTTAACCCTGGAAGGCATTGTACTTTG
TTAGTCATGATTCCTGTGTGCACTGACTCCTGGGGAGAGGTATCTTCTGC
CAGATGTGAAAAATATTCTGATGTTTTGAGTAGTCATAAAAGTTTCTGTG
TGTTTGATGGGTATAATCAGTGGAAGGTCTTATTTTCCATATTTCTTTTT
GCTTCTTGAAGGCAGATTATCCTTTGAAAAATGATTGTTGATGAAAATAA
ATGTTGTAAGGGGCGACATTGAAATTATTACCTAACTGAGCCATAATATT
TTTTTCTTTATCCCAATTTTTATTAAGTATTTCTCTTCATTTACCCTTTA
AATGGCACTCTTGAAAGTCCCCTATTATCTTCTTCCCCGCTCTGCTTAAT
TATTATTCCCTCCCTTTTTTTGTG

Query= MSMg01no405_c17.g1 MSMg01no405_c17.g1 CHROMAT_FILE:
MSMg01no405_c17.g1 PHD_FILE: MSMg01no405_c17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:04 2005
         (526 letters)



>mm_chr5_6726736_6727661
          Length = 926

 Score =  994 bits (514), Expect = 0.0
 Identities = 524/528 (99%), Gaps = 2/528 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   caacttgctaaataaatgatacattttgcaagaaaataataaaagtcatgacatttctaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 caacttgctaaataaatgatacattttgcaagaaaataataaaagtcatgacatttctaa 258

                                                                       
Query: 61  caagatctcataaataataataataaaaaaa--cagaattcattcctcacattgaaacag 118
           |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||
Sbjct: 259 caagatctcataaataataataataaaaaaaaacagaattcattcctcacattgaaacag 318

                                                                       
Query: 119 tgcagctaagaaggaagttatatgtgtggtaaaaacagtcaatatttagacaaaaagtat 178
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tgcagctaaaaaggaagttatatgtgtggtaaaaacagtcaatatttagacaaaaagtat 378

                                                                       
Query: 179 tttttctattcatgaagaatatagaggaattaaaggcctgacaaaaatgttttgtgatgc 238
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tttttctattcatgaagaatatagaggaattaaaggcctgacaaaaatgttttgtgatgc 438

                                                                       
Query: 239 ttttctcagagttctaccccagagcagactacaattgttaaatcttttctctcttgtcta 298
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ttttctcagagttctaccccagagcagactacaattgttaaatcttttctctcttgtcta 498

                                                                       
Query: 299 cttaaccctggaaggcattgtactttgttagtcatgattcctgtgtgcactgactcctgg 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 cttaaccctggaaggcattgtactttgttagtcatgattcctgtgtgcactgactcctgg 558

                                                                       
Query: 359 ggagaggtatcttctgccagatgtgaaaaatattctgatgttttgagtagtcataaaagt 418
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ggagaggtgtcttctgccagatgtgaaaaatattctgatgttttgagtagtcataaaagt 618

                                                                       
Query: 419 ttctgtgtgtttgatgggtataatcagtggaaggtcttattttccatatttctttttgct 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ttctgtgtgtttgatgggtataatcagtggaaggtcttattttccatatttctttttgct 678

                                                           
Query: 479 tcttgaaggcagattatcctttgaaaaatgattgttgatgaaaataaa 526
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tcttgaaggcagattatcctttgaaaaatgattgttgatgaaaataaa 726


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space:   472656
Effective search space used:   472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)