NCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGC
GGAATTCTTATATTTTCCAGAAACTAATACTTTTACTTATATTAACTCTT
ATTTGGGGATACTGAGTACAAAAGGTGTTTTTCTGACATCAATAACTAAA
AGAGATAATGTCAGAGTAAAATGAATAAGAGTTTTATATTTTCTTTAACT
TAATGGAGTCTATATATTTATTCAAAATACAATGTAAACTTTTAATACAT
TAAATTCCATAACAATGGAAACCACAAAGGAAATCGCTAACAACTAAACA
TAAAAAGAAATTAGAAAGGAATATTATGTGTGCATAAAACAGAAGTTGTG
GGAAGCGGTTTCCACTGTGACTGTGTGGCCTAATTGGTAAACAAGCAATG
TGCGCATGTGCGAGAGTGTTTTCGTGCCAAGTCATGGCCCATCCCGGGGC
ATGGTGATGAGGCTCTGGGAGAGCAGCCAATCAGGTGTGGACACGCCACA
CTAAGGTGTATATAAGCAGCGCCTTTTTGGTGCTTGGGGTCTTCCTCTTC
ATGGTGAAACTGGTGTAATAAAGTTGCTGCAGAAGGATCCGGTTTCTCTT
TGGGGTGTTCTTGCTGGCGAAGAAAATATTGGTTGCGGAAAAAAAGTCAG
CTCCCTATAAAGTTGTTTTTATATTTCCTTGCGTCTCCTTTATCTGTTGG
CAATCAATATTTTCCTCCCTCGCACATGTGCATTTGAAAGTTTTTCTCTC
TTCTCCCTCCCTTCTTGTTTTCATCCTTTCACG

CCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTTGATGGGCTGATGGACACTAACTGT
TTATTAATTCACCTGCACATCTACTGCACAGCTTCGGTCTGGCTTCTTCT
CTGTATGGCTTCATTTTTGCATTTGCCCATACTTGAAGAGGGCATCTAAG
TATATTTACAAGGGAAGACATGTGGGAGTTGGTTATTACGATGTTGAATG
CAAACTTTAGATACATGAGTACTCTTTAAGGGTCAAAAGAAACAGAAGTG
ATCTTACATAGATAGGTTCCTACTGTAGCAGTAGAAAGTACTTGGAATTT
TAATAGACTCTGGTTATTATGTTTGGATTAACCTTTACCTATCACCAGCA
TCTTTCCCTCTTTCTTTTTTTCCATCAGTATTTGGTTTTCTATACTATCT
AATCATTTTGGTGTGTGTGTGTGTGTGCGTGTGTGTGCCTGTGTCTGTGC
GCTTAACTGTGGCAGCAATTAATGAAAATATTGGCTGTGATTTTGACAGA
GAGAAAGGAGGGATATATAACAAGCATTGGTAGGATGTATCACATGGGTC
TATGCTTCTTATTCCACCTTTATCTTTTCCCCCTTTTTTCTTTCCTTTTA
TCCCCCCCTTTTTCCCCCTCCCTGTTCTCTCATTTTTCCCCTTCATTCCT
CTTTACCCCCCCTCTTCTTTTTCTTTTTCGCCCTCTTCTTTCCTCTTTTT
CTCCTCCTTTTTCCT

Query= MSMg01no405_n16.g1 MSMg01no405_n16.g1 CHROMAT_FILE:
MSMg01no405_n16.g1 PHD_FILE: MSMg01no405_n16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:58 2005
         (465 letters)



>mm_chr5_83435897_83436761
          Length = 865

 Score =  876 bits (453), Expect = 0.0
 Identities = 462/465 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttgatgggctgatggacactaactgtttattaattcacctgcacatctactgcacagct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 tttgatgggctgatggacactaactgtttattaattcacctgcacatctactgcacagct 528

                                                                       
Query: 61  tcggtctggcttcttctctgtatggcttcatttttgcatttgcccatacttgaagagggc 120
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 527 tcggtctggcttcttctctgtacggcttcatttttgcatttgcccatacttgaagagggc 468

                                                                       
Query: 121 atctaagtatatttacaagggaagacatgtgggagttggttattacgatgttgaatgcaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 atctaagtatatttacaagggaagacatgtgggagttggttattacgatgttgaatgcaa 408

                                                                       
Query: 181 actttagatacatgagtactctttaagggtcaaaagaaacagaagtgatcttacatagat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 actttagatacatgagtactctttaagggtcaaaagaaacagaagtgatcttacatagat 348

                                                                       
Query: 241 aggttcctactgtagcagtagaaagtacttggaattttaatagactctggttattatgtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 aggttcctactgtagcagtagaaagtacttggaattttaatagactctggttattatgtt 288

                                                                       
Query: 301 tggattaacctttacctatcaccagcatctttccctctttctttttttccatcagtattt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tggattaacctttacctatcaccagcatctttccctctttctttttttccatcagtattt 228

                                                                       
Query: 361 ggttttctatactatctaatcattttggtgtgtgtgtgtgtgtgcgtgtgtgtgcctgtg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 ggttttctatactatctaatcattttggtgtgtgtgtgtgtgtgcgtgtgtgtgcctgtg 168

                                                        
Query: 421 tctgtgcgcttaactgtggcagcaattaatgaaaatattggctgt 465
           |||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 167 tctgtgtgtttaactgtggcagcaattaatgaaaatattggctgt 123


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 465
Length of database: 865
Length adjustment: 10
Effective length of query: 455
Effective length of database: 855
Effective search space:   389025
Effective search space used:   389025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)