Query= MSMg01no407_e08.b1 MSMg01no407_e08.b1 CHROMAT_FILE:
MSMg01no407_e08.b1 PHD_FILE: MSMg01no407_e08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:52 2005
(565 letters)
>mm_chr5_17999871_18000835
Length = 965
Score = 1071 bits (554), Expect = 0.0
Identities = 560/562 (99%), Gaps = 2/562 (0%)
Strand = Plus / Plus
Query: 5 gaattcaggtgttc-tgttactatacaatgttctttctgtgaggtatgataaattcatgt 63
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaggtg-tcatgttactatacaatgttctttctgtgaggtatgataaattcatgt 263
Query: 64 ttattgaaactctactcagtagagtattacacaatatagtgcagcgtgaactcacatctg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttattgaaactctactcagtagagtattacacaatatagtgcagcgtgaactcacatctg 323
Query: 124 aaacatgcctggcatatggaatataatctagttagatcatccccatattcccgttgctcc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaacatgcctggcatatggaatataatctagttagatcatccccatattcccgttgctcc 383
Query: 184 ttgatactggccagatgtgttgcttgccctactattttccaagctgggtcacaaggtggt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttgatactggccagatgtgttgcttgccctactattttccaagctgggtcacaaggtggt 443
Query: 244 gctctcaacactcagctatgaagccctgctgtagaggctttcatggactaccaagttagt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gctctcaacactcagctatgaagccctgctgtagaggctttcatggactaccaagttagt 503
Query: 304 cttacattttatggcttttgaatttgattctgcaacttccagctttctaaccccgtgaag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cttacattttatggcttttgaatttgattctgcaacttccagctttctaaccccgtgaag 563
Query: 364 agaatgcttgcaagactaattgataactaatttggttcatgggcgaaagatgaagttggg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agaatgcttgcaagactaattgataactaatttggttcatgggcgaaagatgaagttggg 623
Query: 424 tagtgggtatggaggaaaaagggattggaagaaaacgtgcgtctctccagagttccagtg 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 tagtgggtatggaggaaaaagggattggaagaaaacgtgcgtctctccagagttccagtg 683
Query: 484 ctcacgtgccccgggtgggtgtctagatgtgggaaacaactggtccccatctaagcgggt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ctcacgtgccccgggtgggtgtctagatgtgggaaacaactggtccccatctaagcgggt 743
Query: 544 ggtggacaaggggcagtattag 565
||||||||||||||||||||||
Sbjct: 744 ggtggacaaggggcagtattag 765
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space: 530025
Effective search space used: 530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no407_e08.g1 MSMg01no407_e08.g1 CHROMAT_FILE:
MSMg01no407_e08.g1 PHD_FILE: MSMg01no407_e08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:52 2005
(152 letters)
>mm_chr5_18225610_18226161
Length = 552
Score = 292 bits (151), Expect = 6e-84
Identities = 151/151 (100%)
Strand = Plus / Minus
Query: 1 tcactgattaaaatattaactacacaaatttatactctcaaagatagtgggtaaatgtcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tcactgattaaaatattaactacacaaatttatactctcaaagatagtgggtaaatgtcc 292
Query: 61 cttcctttcataaccttgacatgtgttgttgccatgaaggtagaaatgggaaaaattagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 cttcctttcataaccttgacatgtgttgttgccatgaaggtagaaatgggaaaaattagt 232
Query: 121 ggaagtaatgtgtgtgtgtgttggggagggg 151
|||||||||||||||||||||||||||||||
Sbjct: 231 ggaagtaatgtgtgtgtgtgttggggagggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 152
Length of database: 552
Length adjustment: 8
Effective length of query: 144
Effective length of database: 544
Effective search space: 78336
Effective search space used: 78336
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
