TAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTTGGTTATCAAAGACCTGAATACTATTCTTTTTAAGAACCATGGGGA
AATTAGTCCAGGCAATGAAATGCCAACACTATTTGTATGGAAAAAAGAAC
GTGATTTTTGAGTATGTGTATGTTGCCTATTGATGATGAACAATAGATGA
TGTGTGTGGTAACTCCAGATGGATTAGATGGAGAGCCTGCCTAACTAACC
AGATCCACTGAAAAGTTCACTGTTGAATTCAGGATTTAGAGCAATTTTTC
GACACTCTTGCTTTGTGGCTGTTATTTGTGGTGGTACCATCTGAAACTGG
TTCTTTTTTTGCCTCGTTCCCATACTTAGGAAAGTTTGTTTTTTTGTTTT
TTTGTTTTTGTTTTTCTTTCTTAGATTGCTGTTCAAGCTGTATACATTTA
GCTTTTAACTAGTTGTTTTTAGTTACCAGTCCTTATTCGAACATCTTTGT
AAGTGGCAGTGTCCCCAGGCTGCCATGCTGTCATTCCACGCACTTGTGAG
GAAGCACTTGGTTTAATTTGTAATACTGCTTCTCTTTCCTAAGATCTGTG
TGAAATTTGCTATTGGTCTTGTTTTCATGTTTATTTACCTCATGGTGCTA
GAATTTGATGTAATAAAACATTTCCAGTTTTCACAACATTTTGTACCTTA
AAATTTTTACCAAACAATTGGCTTATCTTTAGTAAACTCCAGAACTTG

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXTTTGTTTAGCTCTGTACCCCATTTTTAAT
AGGGTTTTTTAGTTTTCTGGAGTCCAACTTCTTGAGTTCTTTATATATAT
TGGATGATAGCCACCTATCAAATTTAGTATTAGTAAAGATCTTCCCCCAA
TCTGTTGGTTGCCCTTTTGTCTTATTGACAATGTCCTTTGCCTTACAGAA
GCTTTGCAATTTTATGAGGGCCTATTTGTTGATTCTTGATCTTACAGCAC
AAGCCATTGGTGTTCTGTTCAGGAATCTTTCCCCTGTGCCCATATCTTCC
AGGCTCTTTCTCATCTTTGTCCTCTATATGATTCAGTGTCTTTGGTATTA
TGTGGAGTTCTTTGATCCACTTAGACTTGAGATTTGTGCAAAGAAATAAG
AATGGATCAATTCGCATTCTTCTACATGCTAACCGCCAGTTGAGCCAGCA
CCATTTGTGGAAGGTGTTATCTTCTTTCCACTGGATGGTTTTAGATCCTT
TGTCACACATCAAGTGAACATAGGCGTGCGTGCTCATTTTCTTCCATTCT
CGTTCAATTGAATTTTTGTGCTGGCCCTAAATTTATTTCCTAGCTACTTT
CTATCCCACTTTCTCCCGTTTATTAAGTTTCATTCCCGCAGAATTCTTAT
TCTTCCTCCTCCCCCCTCCCCCATAACACGATAATTTCTCTTATTATCCA
CCCCCCCCTT

Query= MSMg01no407_j15.b1 MSMg01no407_j15.b1 CHROMAT_FILE:
MSMg01no407_j15.b1 PHD_FILE: MSMg01no407_j15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:17 2005
         (535 letters)



>mm_chr5_28695168_28696102
          Length = 935

 Score = 1000 bits (517), Expect = 0.0
 Identities = 529/533 (99%)
 Strand = Plus / Plus

                                                                       
Query: 3   tattctttttaagaaccatggggaaattagtccaggcaatgaaatgccaacactatttgt 62
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tattctttttaagaaccatggggaaattagtccaggcaatgaaatgccaacactatttgt 262

                                                                       
Query: 63  atggaaaaaagaacgtgatttttgagtatgtgtatgttgcctattgatgatgaacaatag 122
           ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 263 atggaaaaaagaaagtgatttttgagtatgtgtatgttgcccattgatgatgaacaatag 322

                                                                       
Query: 123 atgatgtgtgtggtaactccagatggattagatggagagcctgcctaactaaccagatcc 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 atgatgtgtgtggtaactccagatggattagatggagagcctgcctaactaaccagatcc 382

                                                                       
Query: 183 actgaaaagttcactgttgaattcaggatttagagcaatttttcgacactcttgctttgt 242
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 383 actgaaaagttcactgttgaattcagggtttagagcaatttttcgacactcttgctttgt 442

                                                                       
Query: 243 ggctgttatttgtggtggtaccatctgaaactggttctttttttgcctcgttcccatact 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ggctgttatttgtggtggtaccatctgaaactggttctttttttgcctcgttcccatact 502

                                                                       
Query: 303 taggaaagtttgtttttttgtttttttgtttttgtttttctttcttagattgctgttcaa 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 taggaaagtttgtttttttgtttttttgtttttgtttttctttcttagattgctgttcaa 562

                                                                       
Query: 363 gctgtatacatttagcttttaactagttgtttttagttaccagtccttattcgaacatct 422
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gttgtatacatttagcttttaactagttgtttttagttaccagtccttattcgaacatct 622

                                                                       
Query: 423 ttgtaagtggcagtgtccccaggctgccatgctgtcattccacgcacttgtgaggaagca 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ttgtaagtggcagtgtccccaggctgccatgctgtcattccacgcacttgtgaggaagca 682

                                                                
Query: 483 cttggtttaatttgtaatactgcttctctttcctaagatctgtgtgaaatttg 535
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 cttggtttaatttgtaatactgcttctctttcctaagatctgtgtgaaatttg 735


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 935
Length adjustment: 10
Effective length of query: 525
Effective length of database: 925
Effective search space:   485625
Effective search space used:   485625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)