NTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCAAGGCCCATACCTAAACATGATAAAAGCAATCTACAGCAAACCA
GTAGCCAACATCAAAGTAAATGGAGAGAAGCTGGAAGCAATCCCACTAAA
ATCAGGGACTAGACAAGGCTGCCCACTTTCTCCCTACCTTTTCAACATAG
TACTTGAAATATTAGCCAGAGCAATTCGACAACAAAAGGAGATCAAGGGG
ATACAAATTGGAAAAGAGGAAGTCAAAATATCACTTTTTCCAGATGATAT
GATAGTATATATAAGGGACCCTAAAAATTCTACCAGAGAACTCCTAAACC
TGATAAACAGCTTCGGTGAAGTAGCTGGATAAAAAATAAACTCAAACAAG
TCAATGGCCTTTCTCTATACAAAGAATAAACAGGCTGAGAAAGAAATTAG
GGAAACAACACCCTTCTCAATAGTCACAAATAATATAAAATATCTTGGCG
TGACTCTAACTAAGGAAGTGAAAGATCTGTATGATAAAAACTTCAAATCT
CTGAAGAAAGAAATTAAAGAAGATCTCAGAAGATGGAAAGTTCTCCCATG
CTCATGGATTGGCAGGATCAACATTGTAAAAATGGCTATCTTGCCAAAAG
CAATCTACAGATTCNATGCAATCCCCATCAAAATTCCAACTCAATTCTTC
AACGAATTAAAAAGAAGCAATTTGCAAATTCATCTGGGAAAAAAAAAAAN

NCGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXTATCTGATAAACCCAGCCTGCTA
CTGTCATCTCCATCAGGTCTCATATGATATTATATGCCTATTATGTATCC
ACCTATCTATCATCTGTGTATTTTCTATCTATCTATCTATCTATCTATCT
ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAT
CTATCTATCTATCTATCATGTGTTTATAATGAATTTCTCATTCATGCATC
TTTCATTTACTTATCTATCCATTTATTCATTTATGTCTTCACTGAGAGAA
TGTAAAATATGACATTCAAACTGTGATCAATTTTAATTTATAAACATTTC
AGTGTCATTGGGATGAACCCTCTACATTGATATGTTAAAGACACAGTTAC
CAACTTCTACTTCAGTCTTCCTAAAGAACAAAAACACTATTCTGTGGAAC
AAAGATGTATTCTAGTCACTGATTTCAAACTCAAGAGTTAAATATTTGTA
ATCCATAATAAGAAATAATTTATAGTTAAGTTGCATATATTAAATTACAA
CATGCCCCTAAATTTAGTAAAACTTTATAGGCCCCGNCATGTGTTTTTAT
CCTGTTGAATATTTACCGAAGGAAAACAAATGTAGCAATTAAAAGGGGGT
AGACCTTGATTTAAAATTTAGTAAAATGAAAAGAATGCTTTT

Query= MSMg01no407_l14.g1 MSMg01no407_l14.g1 CHROMAT_FILE:
MSMg01no407_l14.g1 PHD_FILE: MSMg01no407_l14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:27 2005
         (477 letters)



>mm_chr5_71541618_71542494
          Length = 877

 Score =  768 bits (397), Expect = 0.0
 Identities = 445/477 (93%), Gaps = 28/477 (5%)
 Strand = Plus / Plus

                                                                       
Query: 1   tatctgataaacccagcctgctactgtcatctccatcaggtctcatatgatattatatgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 tatctgataaacccagcctgctactgtcatctccatcaggtctcatatgatattatatgc 288

                                                                       
Query: 61  ctattatgtatccacctatctatcatctgtgtattttctatctatctatctatctatcta 120
           ||||||||||||||||||||||||||||           |||| ||||||| ||||||||
Sbjct: 289 ctattatgtatccacctatctatcatct-----------atct-tctatct-tctatcta 335

                                                                       
Query: 121 tctatctatctatctatctatctatctatctatctatctatctatctatctatctatcta 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct: 336 tctatctatctatctatctatctatctatctatctatctatctatctatctatctat--- 392

                                                                       
Query: 181 tctatctatcatgtgtttataatgaatttctcattcatgcatctttcatttacttatcta 240
                       ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ------------gtgtttataatgaatttctcattcatgcatctttcatttacttatcta 440

                                                                       
Query: 241 tccatttattcatttatgtcttcactgagagaatgtaaaatatgacattcaaactgtgat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tccatttattcatttatgtcttcactgagagaatgtaaaatatgacattcaaactgtgat 500

                                                                       
Query: 301 caattttaatttataaacatttcagtgtcattgggatgaaccctctacattgatatgtta 360
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaattttaatttataaacatttcagtgtcattgggatgaaccctctacattgatatgtta 560

                                                                       
Query: 361 aagacacagttaccaacttctacttcagtcttcctaaagaacaaaaacactattctgtgg 420
           ||||||||||||||||||| || ||||||||||||||| |||||||||||||||||||||
Sbjct: 561 aagacacagttaccaacttttatttcagtcttcctaaacaacaaaaacactattctgtgg 620

                                                                    
Query: 421 aacaaagatgtattctagtcactgatttcaaactcaagagttaaatatttgtaatcc 477
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aacaaagatgtattctagtcactgatttcaaactcaagagttaaatatttgtaatcc 677


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 86
Number of extensions: 28
Number of successful extensions: 28
Number of sequences better than 10.0: 1
Number of HSP's gapped: 21
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space:   404889
Effective search space used:   404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)