NTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTTGCTGGTAGCTACTAGCTCGGGCGAGAAGTGGCGCCGAGAAAC
CCGGGAATTTATCATCACCAGGCGCTGAGACCCCCCTCTCCCCCCCGCCC
CTCCCCCCCCCCGTTTCATGGGGCGGGTTCAGAACTACAGGACACTTTAC
AGCTCTACAAGGTACGTTCGGTCTTGAATTTTCTCCAGCGTTAGAAGCCT
TTCTGTTCCTTTTCACAGGGCTCGTTCTTTTTCATTTGATTACATACTGT
TTCCACTGGTGGTATTGCTGACTGTTTCTCAGTCGCGGNCAGGCCTGGAC
AGCGACCAGTATTGCTGACTGGTTCTCAGTTGCGGTCAGGCCTGGACAGC
GACCAGTATGTGGGCCTCCCACTCTGTGGTGACCGCCTTATGGTCGGTCC
TGAAGCAGCATGGCTTGAAAGTCGCCAGCAAGACATTAGAAGGCTGTGTA
AAAGAGGTAGATCGCATAGCACCGTGGTTTGCGTGCTCAGGGTCCTTAAC
TATCCCCTCTTGGAAGAAACTCCAGGGAGATTTAGTTAGGGAACTGTGAG
AAGTGTTACTTAAAGCAGGAATCCTGCCGCTGCGTAAGCTGATAAAATCG
TGGCTTAGGTTTTTTTTTTGGCTCATGGTGGGATAACGCTCTGCCAAAAT
TTCTGGATCTAGTTGCGACCGTCTATTTTTGGAGTTGCGCCGCGATAATG
TCCGGACATGACGAGTG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXAGACCAACCATAAGCTCCCCAGAA
GAACTTCCACAGGTTCTCATCAGTAAGCAATCCCTCTGCTTGACTCTCAT
TAGGCACTTAACTACTACCAGCTAATGTGGGTGTTTATCACTTGTCTATT
CTGTCTTGAAAACAGGGATTTTGCTCAGAAGGTTTTATTGTCTTATCTAT
TCCCAGGACCTGGAAGAATTCTGAGAACAAGAAGGCTTTGAATAAATGCT
TAGTGAAATAGTGAATTCATGGTTGTTTTTGTTTTGGAAAAACACATGAA
AATATCAGTGGGCTAAGGCATAGAGTTCTTCCATCAGAACATAACTTCCT
ATTGTTGCTTCTAAACTGATTTCATATCCATTTTGGAGTCTAAACTTGGC
ATTTTAATGTATTCTCATTTCTCCACTTATTACTTATCTGTGCTAAATTT
TAATCTAAGAATTTTAATTATTAAATGCCAATTGTATTGACTCTGTAAGT
AAGTAAAGTGGGAACCTGGGTGAGAAGAAGGATCACAAGTTCAAGAGCAT
CTTGGCCTACATAATGAGTCTTCCTCTCGAAACACACGTATACATACACA
ACACACACACTCTCTCTTTTTTCTCATAATACACTCACTTACACCCACAC
TTATCCCACATGCCAACACATCATACAGAACAAATGTCAA

Query= MSMg01no409_g11.g1 MSMg01no409_g11.g1 CHROMAT_FILE:
MSMg01no409_g11.g1 PHD_FILE: MSMg01no409_g11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:45 2005
         (529 letters)



>mm_chr5_46347778_46348706
          Length = 929

 Score =  992 bits (513), Expect = 0.0
 Identities = 525/529 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   agaccaaccataagctccccagaagaacttccacaggttctcatcagtaagcaatccctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 agaccaaccataagctccccagaagaacttccacaggttctcatcagtaagcaatccctc 670

                                                                       
Query: 61  tgcttgactctcattaggcacttaactactaccagctaatgtgggtgtttatcacttgtc 120
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 669 tgcttgactctcattaggcacttaactactatcagctaatgtgggtgtttatcacttgtc 610

                                                                       
Query: 121 tattctgtcttgaaaacagggattttgctcagaaggttttattgtcttatctattcccag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tattctgtcttgaaaacagggattttgctcagaaggttttattgtcttatctattcccag 550

                                                                       
Query: 181 gacctggaagaattctgagaacaagaaggctttgaataaatgcttagtgaaatagtgaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gacctggaagaattctgagaacaagaaggctttgaataaatgcttagtgaaatagtgaat 490

                                                                       
Query: 241 tcatggttgtttttgttttggaaaaacacatgaaaatatcagtgggctaaggcatagagt 300
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 tcatggttgcttttgttttggaaaaacacatgaaaatatcagtgggctaaggcatagagt 430

                                                                       
Query: 301 tcttccatcagaacataacttcctattgttgcttctaaactgatttcatatccattttgg 360
           |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 429 tcttccatcataacataacttcctattgttgcttctatactgatttcatatccattttgg 370

                                                                       
Query: 361 agtctaaacttggcattttaatgtattctcatttctccacttattacttatctgtgctaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 agtctaaacttggcattttaatgtattctcatttctccacttattacttatctgtgctaa 310

                                                                       
Query: 421 attttaatctaagaattttaattattaaatgccaattgtattgactctgtaagtaagtaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 attttaatctaagaattttaattattaaatgccaattgtattgactctgtaagtaagtaa 250

                                                            
Query: 481 agtgggaacctgggtgagaagaaggatcacaagttcaagagcatcttgg 529
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 agtgggaacctgggtgagaagaaggatcacaagttcaagagcatcttgg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 529
Length of database: 929
Length adjustment: 10
Effective length of query: 519
Effective length of database: 919
Effective search space:   476961
Effective search space used:   476961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)