Query= MSMg01no410_h15.b1 MSMg01no410_h15.b1 CHROMAT_FILE:
MSMg01no410_h15.b1 PHD_FILE: MSMg01no410_h15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:14 2005
(243 letters)
>mm_chr5_70099448_70100090
Length = 643
Score = 443 bits (229), Expect = e-129
Identities = 238/241 (98%)
Strand = Plus / Plus
Query: 1 tccagcttgctcaattctatttttggctttttcttgtgttacctcagatattaagaacta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccagcttgctcaattctatttttggctttttcttgtgttacctcagatattaagaacta 260
Query: 61 actagatacatttctttgagctgaagtctttagcatgtaatttatagattatgtagccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actagatacatttctttgagctgaagtctttagcatgtaatttatagattatgtagccat 320
Query: 121 ttctggatgattctttttatttgcttaatcactgacatcaatgctgggaaacactttcac 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 ttctggatgattctttttatttgcttaatcactgacatcaatgctgggaaacacacacac 380
Query: 181 acacacacacacacacacacacacacacacacacacacattagttaacaagcatgactat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acacacacacacacacacacacacacacacacacacacattagttaacaagcatgactat 440
Query: 241 c 241
|
Sbjct: 441 c 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 14
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no410_h15.g1 MSMg01no410_h15.g1 CHROMAT_FILE:
MSMg01no410_h15.g1 PHD_FILE: MSMg01no410_h15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:14 2005
(447 letters)
>mm_chr5_70253730_70254576
Length = 847
Score = 843 bits (436), Expect = 0.0
Identities = 445/448 (99%), Gaps = 1/448 (0%)
Strand = Plus / Minus
Query: 1 tcttcctagaatttttttaaagaagctaaaatcatccaataactgattggacaaataatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 tcttcctagaatttttttaaagaagctaaaatcatccaataactgattggacaaataatg 389
Query: 61 aattttctgagcttaatatctacttaaacacaaaatgcatatattttccctatttgagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 aattttctgagcttaatatctacttaaacacaaaatgcatatattttccctatttgagat 329
Query: 121 tctctatttttagtgtgtttatacatactctaagttaagtaacaatccctctctataatt 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 tctctgtttttagtgtgtttatacatactctaagttaagtaacaatccctctctataatt 269
Query: 181 agctttaaatgaatattattttcttcttgagatttttctcaacaaatattactttaattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 agctttaaatgaatattattttcttcttgagatttttctcaacaaatattactttaattc 209
Query: 241 atcatttcttttattatttgaaaactttatattaaaata-ttttgatgatttcaagatgt 299
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 208 atcatttcttttattatttgaaaactttatattaaaatatttttgatgatttcaagatgt 149
Query: 300 tttcaagtttaaaacccttcacgtttgaatagtagttgtgacttgatgcttaccctatag 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 tttcaagtttaaaacccttcacgtttgaatagtagttgtgacttgatgcttaccctatag 89
Query: 360 atacaaaccactgtgtatagattgagctgcttgagcaaggcagtacacagtgtgaggttg 419
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 88 atacaaaccactgtgtatagattgagctgcttgagcaaggcagtagacagtgtgaggttg 29
Query: 420 acaagacaaagtgtccatgcatatgtaa 447
||||||||||||||||||||||||||||
Sbjct: 28 acaagacaaagtgtccatgcatatgtaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
