Query= MSMg01no412_h04.b1 MSMg01no412_h04.b1 CHROMAT_FILE:
MSMg01no412_h04.b1 PHD_FILE: MSMg01no412_h04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:48 2005
(417 letters)
>mm_chr5_134801576_134802392
Length = 817
Score = 746 bits (386), Expect = 0.0
Identities = 398/402 (99%)
Strand = Plus / Minus
Query: 1 ataatagctatatctagcacgtggggtttctttcctctgtttcctgtgcactgtggcact 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 402 ataatagctatatctagcacgtggggtttctttcctctgtttcctgtgcgctgtggcact 343
Query: 61 tccccgaccgtataggctcttctatgtgtgtacatgcatgcgtgtggcatatgcatgtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tccccgaccgtataggctcttctatgtgtgtacatgcatgcgtgtggcatatgcatgtgg 283
Query: 121 acacatgtacactcttccactttgtgtggaagccaaaggctggtgacaggtatgttcctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 acacatgtacactcttccactttgtgtggaagccaaaggctggtgacaggtatgttcctt 223
Query: 181 aattgcatcttcacaatttttgttttgttttgtttttgagacggggtcttactaggtaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 aattgcatcttcacaatttttgttttgttttgtttttgagacggggtcttactaggtaac 163
Query: 241 cctggactgcctgtaactagctgtgtagatcaggctggtctcaaactcacagaaactggc 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 cctggactgcctggaactagctgtgtagatcaggctggtctcaaactcacagaaactggc 103
Query: 301 ttggttctgcctcctgagtgctgggattaaaggtgtgcaccaccatactcagcttcacct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 ttggttctgcctcctgagtgctgggattaaaggtgtgcaccaccatactcagcttcacct 43
Query: 361 taaaatgtatttgttgccgggcatggtgacacacgcctttaa 402
|||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 42 taaaatttatttgtcgccgggcatggtgacacacgcctttaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 417
Length of database: 817
Length adjustment: 9
Effective length of query: 408
Effective length of database: 808
Effective search space: 329664
Effective search space used: 329664
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no412_h04.g1 MSMg01no412_h04.g1 CHROMAT_FILE:
MSMg01no412_h04.g1 PHD_FILE: MSMg01no412_h04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:48 2005
(432 letters)
>mm_chr5_134580523_134581354
Length = 832
Score = 774 bits (400), Expect = 0.0
Identities = 427/440 (97%), Gaps = 8/440 (1%)
Strand = Plus / Plus
Query: 1 actctgtagccaagacaagccttgaactcaggatttttccatctcatcgtcccagcgcct 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 193 actctgtagccaagacaagccttgaactcgggatttttccatctcatcgtcccagtgcct 252
Query: 61 gggataccccatccagcttcttcattttcattgattctctgtcatattctaaatctctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gggataccccatccagcttcttcattttcattgattctctgtcatattctaaatctctcc 312
Query: 121 tcttgtccctcctcccctccatattccctctctctgtgtgtctctg----tctctttctg 176
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 313 tcttgtccctcctcccctccatattccctctctctgtgtgtctctgtctctctctttctg 372
Query: 177 tctctgtc----tctctctctctctgtctctctcccacccccctctgcccctcaccccct 232
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tctctgtctctgtctctctctctctgtctctctcccacccccctctgcccctcaccccct 432
Query: 233 ttttcctggaactcattgtatagcctaggctgacctcaaacttgggataactgccctttt 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 ttttcctggaactcattgtatagcctaggctgacctcaaacttgggataactgccctttt 492
Query: 293 ccatcctttaagtactgggagtgaacttccacccctggcttaagctatatggtgcaccta 352
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 493 ccatcctttaagtactgggagtgaacttccacccctggcttaagctgtatggtgcaccta 552
Query: 353 ggtttttttcctcctagtctccacagctccgtttcttgacctcttcgcagcatatggata 412
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ggtttttttcctcttagtctccacagctccgtttcttgacctcttcgcagcatatggata 612
Query: 413 aatcaagggtctctctttag 432
|||||||||||||| |||||
Sbjct: 613 aatcaagggtctctttttag 632
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space: 348129
Effective search space used: 348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
